RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 TRIM66O15016 1216 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIM28Q13263 835 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TSNQ15631 228 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CDC73Q6P1J9 531 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PEG10Q86TG7 708 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 LONP2Q86WA8 852 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ADGRE3Q9BY15 652 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIT1Q9H3H1 467 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 AVENQ9NQS1 362 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ASAP1Q9ULH1 1129 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 NFICP08651 508 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIM49P0CI25 452 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TRIM49CP0CI26 452 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ACADMP11310 421 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ENO3P13929 434 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 VHLP40337 213 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 HIRAP54198 1017 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PHACTR4Q8IZ21 702 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 C1orf54Q8WWF1 131 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 C1QTNF7Q9BXJ2 289 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PDGFCQ9NRA1 345 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 COPG2Q9UBF2 871 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 NEDD4P46934 1319 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TPD52L2O43399 206 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 S100A9P06702 114 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 S100GP29377 79 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF284Q2VY69 593 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TMEM154Q6P9G4 183 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 KRT73Q86Y46 540 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CAMK1DQ8IU85 385 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SLC22A9Q8IVM8 553 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SYNE4Q8N205 404 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 AGR3Q8TD06 166 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF483Q8TF39 744 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 VMP1Q96GC9 406 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CATSPER2Q96P56 530 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PNPLA7Q6ZV29 1317 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CPDO75976 1380 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 NCOA3Q9Y6Q9 1424 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 EPB42P16452 691 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SNRNP35Q16560 246 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 OLFML1Q6UWY5 402 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CHST13Q8NET6 341 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 INPP5DQ92835 1189 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 THG1LQ9NWX6 298 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 AGAP1Q9UPQ3 857 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CYP19A1P11511 503 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 GRK4P32298 578 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 USP17L6PQ6QN14 398 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PRPF39Q86UA1 669 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CHSY1Q86X52 802 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SP8Q8IXZ3 490 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SAMD3Q8N6K7 520 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SPATA18Q8TC71 538 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 OSBP2Q969R2 916 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 GPR101Q96P66 508 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 FHDC1Q9C0D6 1143 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CCT8L1PA6NM43 557 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 IFRD1O00458 451 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 STX7O15400 261 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 C21orf2O43822 256 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ITGALP20701 1170 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PTGER2P43116 358 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 MCAMP43121 646 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TAB1Q15750 504 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PALB2Q86YC2 1186 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 DENND6AQ8IWF6 608 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF655Q8N720 491 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ZNF557Q8N988 423 aaPredicted RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 MANSC1Q9H8J5 431 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 TMEM8AQ9HCN3 771 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 ENTPD7Q9NQZ7 604 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 HACL1Q9UJ83 578 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CD2BP2O95400 341 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 CHRM3P20309 590 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 YTHDF3Q7Z739 585 aaKnown RBP9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 S100A13Q99584 98 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 GANQ9H2C0 597 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 RAB6BQ9NRW1 208 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SH3BP4Q9P0V3 963 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 SORCS3Q9UPU3 1222 aa9.19□□□□□ -0.94
SHROOM4-203ENST00000460112 PNMA8CA0A1B0GUJ8 204 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 FKBP6O75344 327 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 VPS4BO75351 444 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 IRF1P10914 325 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 GPC1P35052 558 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TAF1CQ15572 869 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 C12orf60Q5U649 245 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 NANOGNBQ7Z5D8 188 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 RNASE11Q8TAA1 199 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 NFKBIZQ9BYH8 718 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ILKAPQ9H0C8 392 aaPredicted RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 TMA7Q9Y2S6 64 aaKnown RBP9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ERBB3P21860 1342 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 DDHD2O94830 711 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 F9P00740 461 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 ALG11Q2TAA5 492 aa9.18□□□□□ -0.94
SHROOM4-203ENST00000460112 NEK5Q6P3R8 708 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms