RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 BCAT1P54687 386 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 EPHB3P54753 998 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 NHLH1Q02575 133 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 GFPT1Q06210 699 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 BST2Q10589 180 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 MTF1Q14872 753 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 CYP4A22Q5TCH4 519 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 VSTM1Q6UX27 236 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 GRASPQ7Z6J2 395 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 SCUBE3Q8IX30 993 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 CLEC4CQ8WTT0 213 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 SMG7Q92540 1137 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 SYN2Q92777 582 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF707Q96C28 371 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 C8orf48Q96LL4 319 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 SYT11Q9BT88 431 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 PRKD2Q9BZL6 878 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 NUCKS1Q9H1E3 243 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 PLEKHA4Q9H4M7 779 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 NHEJ1Q9H9Q4 299 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 CSNK1G1Q9HCP0 422 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF334Q9HCZ1 680 aaPredicted RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 ABCB6Q9NP58 842 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 SPTLC3Q9NUV7 552 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 IMPACTQ9P2X3 320 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 DNMT3BQ9UBC3 853 aaKnown RBP9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
CLTCL1-204ENST00000458188 PRRC2BQ5JSZ5 2229 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 A0A087X0T9 212 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 SOWAHDA6NJG2 315 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 E5RJQ4 531 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TNFRSF10BO14763 440 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 XPO1O14980 1071 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 GJB6O95452 261 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 ERBB2P04626 1255 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 CYP1A1P04798 512 aaPredicted RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 PTMAP06454 111 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 FAM228BP0C875 321 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 ALADP13716 330 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 HMGA1P17096 107 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 KCNA5P22460 613 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 HNRNPH3P31942 346 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 SLC8A3P57103 927 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 NOMO3P69849 1222 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 ADIGQ0VDE8 80 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TAF10Q12962 218 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 PDCLQ13371 301 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 VEPH1Q14D04 833 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 STILQ15468 1287 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TAF5Q15542 800 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 CLEC16AQ2KHT3 1053 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 CTC1Q2NKJ3 1217 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 PTPN20Q4JDL3 420 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TMEM184AQ6ZMB5 413 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 MMS22LQ6ZRQ5 1243 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 DENND5BQ6ZUT9 1274 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 ZNF677Q86XU0 584 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 NUP93Q8N1F7 819 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TMEM35BQ8NCS4 154 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 PABPC5Q96DU9 382 aaKnown RBP9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TCEAL4Q96EI5 215 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 PPP1R13BQ96KQ4 1090 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 CCDC42Q96M95 316 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 CPXM1Q96SM3 734 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 C11orf70Q9BRQ4 267 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 ULBP1Q9BZM6 244 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 S1PR5Q9H228 398 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 LHX5Q9H2C1 402 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 DEF6Q9H4E7 631 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 SYNCQ9H7C4 482 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 NUDT5Q9UKK9 219 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 TFR2Q9UP52 801 aa9.15□□□□□ -0.94
CLTCL1-204ENST00000458188 NLRC5Q86WI3 1866 aa9.15□□□□□ -0.95
CLTCL1-204ENST00000458188 COL4A4P53420 1690 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 A0A1W2PRU2 124 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 GOLGA6L6A8MZA4 724 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 GOLGA8SH3BPF8 625 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 ATMINO43313 823 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 AKR1B10O60218 316 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 GRAP2O75791 330 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 FTLP02792 175 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 UNGP13051 313 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 PTPN2P17706 415 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 SP100P23497 879 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 YWHAQP27348 245 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 GABRR2P28476 465 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 CCR2P41597 374 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 PLA2G4AP47712 749 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 KIF11P52732 1056 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 RNASE9P60153 205 aaKnown RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 CYP4F8P98187 520 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 FOXK2Q01167 660 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 MEA1Q16626 185 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 SLC5A9Q2M3M2 681 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 ASTE1Q2TB18 679 aaPredicted RBP9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 CCDC122Q5T0U0 273 aa9.14□□□□□ -0.95
CLTCL1-204ENST00000458188 STXBP5Q5T5C0 1151 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms