RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 APOBEC3GQ9HC16 384 aaKnown RBP17.47■□□□□ 0.39
NCKIPSD-208ENST00000454134 FBRSL1Q9HCM7 1045 aaKnown RBP17.47■□□□□ 0.39
NCKIPSD-208ENST00000454134 KRT82Q9NSB4 513 aa17.47■□□□□ 0.39
NCKIPSD-208ENST00000454134 FAM49BQ9NUQ9 324 aa17.47■□□□□ 0.39
NCKIPSD-208ENST00000454134 SMPD4Q9NXE4 827 aa17.47■□□□□ 0.39
NCKIPSD-208ENST00000454134 WDR87Q6ZQQ6 2873 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 SCAMP3O14828 347 aaKnown RBP17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 LILRB5O75023 590 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 AP1G2O75843 785 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 YWHAQP27348 245 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 DMWDQ09019 674 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 PPP2R5DQ14738 602 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 EML3Q32P44 896 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 TMEM196Q5HYL7 178 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 PKN3Q6P5Z2 889 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 CPA6Q8N4T0 437 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 DCLK2Q8N568 766 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 SLC2A14Q8TDB8 520 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 SMARCD1Q96GM5 515 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 SLITRK1Q96PX8 696 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 TWNKQ96RR1 684 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 IMPG2Q9BZV3 1241 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 ECT2Q9H8V3 914 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 DMAP1Q9NPF5 467 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 CHORDC1Q9UHD1 332 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 PCDHA5Q9Y5H7 936 aa17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 HELZP42694 1942 aaKnown RBP17.46■□□□□ 0.39
NCKIPSD-208ENST00000454134 LEFTY2O00292 366 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 BEST1O76090 585 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 GJA4P35212 333 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 PPP3CCP48454 512 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 PDE6CP51160 858 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 SLC5A3P53794 718 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 GRSF1Q12849 480 aaKnown RBP eCLIP17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 ZNF658Q5TYW1 1059 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 UNC93AQ86WB7 457 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 CRYBG2Q8N1P7 616 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 ZMIZ2Q8NF64 920 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 ATP2A3Q93084 1043 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 FBXO32Q969P5 355 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 SMOQ99835 787 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 FAM126AQ9BYI3 521 aaPredicted RBP17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 TMEM8AQ9HCN3 771 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 CPQQ9Y646 472 aa17.45■□□□□ 0.38
NCKIPSD-208ENST00000454134 FRYLO94915 3013 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 CHURC1-FNTBB4DL54 471 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 K7ESF4 209 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 TRDMT1O14717 391 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 TNFRSF10BO14763 440 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 CETN3O15182 167 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 RTN3O95197 1032 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 SMC2O95347 1197 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 OAS1P00973 400 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 EGFP01133 1207 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 TCF3P15923 654 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 PFKLP17858 780 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 CD58P19256 250 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 ADORA2BP29275 332 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 FNTBP49356 437 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 GALK1P51570 392 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 PMS1P54277 932 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 NRLP54845 237 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 MAP3K7CLP57077 242 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 SLC7A9P82251 487 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 HEATR6Q6AI08 1181 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 ISM2Q6H9L7 571 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 RUBCNQ92622 972 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 SEMA4DQ92854 862 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 SMARCE1Q969G3 411 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 GSDMAQ96QA5 445 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 NIF3L1Q9GZT8 377 aa17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 SMG5Q9UPR3 1016 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-208ENST00000454134 EP300Q09472 2414 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 GVINP1Q7Z2Y8 2422 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 OLFM2O95897 454 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 EPB41P11171 864 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 MBL2P11226 248 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 AMPD2Q01433 879 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 ENPEPQ07075 957 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 INCA1Q0VD86 236 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 KRT39Q6A163 491 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 ANKRD40Q6AI12 368 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 KIAA2013Q8IYS2 634 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 SYNPOQ8N3V7 929 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 JAKMIP2Q96AA8 810 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 P2RY13Q9BPV8 354 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 EPC1Q9H2F5 836 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 CYP3A43Q9HB55 503 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 POLR3BQ9NW08 1133 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 GMIPQ9P107 970 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 CFAP97Q9P2B7 532 aa17.43■□□□□ 0.38
NCKIPSD-208ENST00000454134 GPR179Q6PRD1 2367 aa17.42■□□□□ 0.38
NCKIPSD-208ENST00000454134 TRIM49BA6NDI0 452 aa17.42■□□□□ 0.38
NCKIPSD-208ENST00000454134 COCHO43405 550 aa17.42■□□□□ 0.38
NCKIPSD-208ENST00000454134 GTF2H1P32780 548 aa17.42■□□□□ 0.38
NCKIPSD-208ENST00000454134 PGFP49763 221 aa17.42■□□□□ 0.38
NCKIPSD-208ENST00000454134 MXI1P50539 228 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms