RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 GPR88Q9GZN0 384 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 KRT82Q9NSB4 513 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 FAM49BQ9NUQ9 324 aa15.47■□□□□ 0.07
USP39-206ENST00000448971 SMG5Q9UPR3 1016 aaKnown RBP15.47■□□□□ 0.07
USP39-206ENST00000448971 MRPS17Q9Y2R5 130 aaKnown RBP15.47■□□□□ 0.07
USP39-206ENST00000448971 MAP1BP46821 2468 aaKnown RBP15.46■□□□□ 0.07
USP39-206ENST00000448971 SDK1Q7Z5N4 2213 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 F8VP50 259 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 CLDN5O00501 218 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 NOL4O94818 638 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 AFPP02771 609 aaKnown RBP15.46■□□□□ 0.07
USP39-206ENST00000448971 CCDC130P13994 396 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 SDHBP21912 280 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 MARSP56192 900 aaKnown RBP15.46■□□□□ 0.07
USP39-206ENST00000448971 IFRD2Q12894 506 aaPredicted RBP15.46■□□□□ 0.07
USP39-206ENST00000448971 ZNF394Q53GI3 561 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 CCDC183Q5T5S1 534 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 DNASE1L2Q92874 299 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 SMARCD2Q92925 531 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 SMARCD1Q96GM5 515 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 ASB16Q96NS5 453 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 NT5C1BQ96P26 610 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 TWNKQ96RR1 684 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 ARID3AQ99856 593 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 B3GNT5Q9BYG0 378 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 IL21Q9HBE4 155 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 ZFP14Q9HCL3 533 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.07
USP39-206ENST00000448971 PRR5-ARHGAP8B1AHC4 643 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 CILPO75339 1184 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 HMGA1P17096 107 aaKnown RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 ADORA2BP29275 332 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 MTIF2P46199 727 aaKnown RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 ARHGAP8P85298 464 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 KCNH2Q12809 1159 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 CUL2Q13617 745 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 SASS6Q6UVJ0 657 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 DENND5BQ6ZUT9 1274 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 FAM114A1Q8IWE2 563 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 TTC39CQ8N584 583 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 SLC2A14Q8TDB8 520 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 MRPS31Q92665 395 aaKnown RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 TRMT2BQ96GJ1 504 aaKnown RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 FAXDC2Q96IV6 333 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 SPATA17Q96L03 361 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 C8orf48Q96LL4 319 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 ZSWIM3Q96MP5 696 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 CHRDQ9H2X0 955 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 PARD6AQ9NPB6 346 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 DMAP1Q9NPF5 467 aaPredicted RBP15.45■□□□□ 0.06
USP39-206ENST00000448971 TRPV5Q9NQA5 729 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 CISHQ9NSE2 258 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 EHD2Q9NZN4 543 aa15.45■□□□□ 0.06
USP39-206ENST00000448971 MAN2B1O00754 1011 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 DPYSL4O14531 572 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 P4HA2O15460 535 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 AP1G2O75843 785 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 TBXAS1P24557 533 aaPredicted RBP15.44■□□□□ 0.06
USP39-206ENST00000448971 ERCC5P28715 1186 aaPredicted RBP15.44■□□□□ 0.06
USP39-206ENST00000448971 CACNA2D1P54289 1103 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 GRM2Q14416 872 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 RBM43Q6ZSC3 357 aaKnown RBP15.44■□□□□ 0.06
USP39-206ENST00000448971 FUKQ8N0W3 1084 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 PPM1KQ8N3J5 372 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 SECISBP2LQ93073 1101 aaKnown RBP15.44■□□□□ 0.06
USP39-206ENST00000448971 TATDN2Q93075 761 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 CEP295NLQ96MC4 621 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 MED15Q96RN5 788 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 TRMT61BQ9BVS5 477 aaKnown RBP15.44■□□□□ 0.06
USP39-206ENST00000448971 TASP1Q9H6P5 420 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 BRD9Q9H8M2 597 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 TRPC7Q9HCX4 862 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 PTPRDP23468 1912 aa15.44■□□□□ 0.06
USP39-206ENST00000448971 TADA3O75528 432 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 KRT37O76014 449 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 FAM200BP0CF97 657 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 AVPR1AP37288 418 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 LMNB2Q03252 620 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 STX1AQ16623 288 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 HSP90AA4PQ58FG1 418 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 VITQ6UXI7 678 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 CRYBG2Q8N1P7 616 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 C12orf29Q8N999 325 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 WHAMMQ8TF30 809 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 IRF7Q92985 503 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 JAKMIP2Q96AA8 810 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 THAP9Q9H5L6 903 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 LMAN1LQ9HAT1 526 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 TMEM30AQ9NV96 361 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 ZMYM5Q9UJ78 669 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 NDRG2Q9UN36 371 aaKnown RBP15.43■□□□□ 0.06
USP39-206ENST00000448971 COL4A2P08572 1712 aa15.43■□□□□ 0.06
USP39-206ENST00000448971 DCDC2BA2VCK2 349 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 PMM2O15305 246 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 F11P03951 625 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 PSMC3P17980 439 aa15.42■□□□□ 0.06
USP39-206ENST00000448971 DDX6P26196 483 aaKnown RBP eCLIP15.42■□□□□ 0.065e-6■■■■■ 34.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms