RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 NUDCD3Q8IVD9 361 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 CCDC33Q8N5R6 958 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 ACTRT2Q8TDY3 377 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 NUF2Q9BZD4 464 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PARVGQ9HBI0 331 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 KLHL11Q9NVR0 708 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 HERC5Q9UII4 1024 aaKnown RBP9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 SORCS3Q9UPU3 1222 aa9.81□□□□□ -0.84
SYNPO2-204ENST00000448416 PI4K2BG5E9Z4 385 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ATP5BP06576 529 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 KLRK1P26718 216 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 VAMP7P51809 220 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 GAD2Q05329 585 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC18A2Q05940 514 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 PSMD6Q15008 389 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ZNF423Q2M1K9 1284 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 C2CD6Q53TS8 623 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 PPP1R18Q6NYC8 613 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 TAB3Q8N5C8 712 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 PIGBQ92521 554 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 HEPHQ9BQS7 1158 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ARMC7Q9H6L4 198 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 NR2E3Q9Y5X4 410 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 GPC6Q9Y625 555 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 TBC1D12O60347 775 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SLITRK3O94933 977 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 KLHL2O95198 593 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 HIBADHP31937 336 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 EIF2B2P49770 351 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 MFAP3P55082 362 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 TAS2R40P59535 323 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 LLGL2Q6P1M3 1020 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ELMSAN1Q6PJG2 1045 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 LRRC47Q8N1G4 583 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 CATSPER1Q8NEC5 780 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 DDHD1Q8NEL9 900 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 KREMEN1Q96MU8 473 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 NACA2Q9H009 215 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 TRPC7Q9HCX4 862 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 CROTQ9UKG9 612 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 PADI4Q9UM07 663 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 LOC100653049A0A140TA62 436 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 KRT34O76011 436 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ZNF23P17027 643 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC5A3P53794 718 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SPIRE1Q08AE8 756 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SEPT6Q14141 434 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 USP41Q3LFD5 358 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 MSS51Q4VC12 460 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 EPC2Q52LR7 807 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ASPRV1Q53RT3 343 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 ZNF720Q7Z2F6 126 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 GPATCH1Q9BRR8 931 aaKnown RBP9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 JMJD4Q9H9V9 463 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 IFT122Q9HBG6 1241 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 PPME1Q9Y570 386 aa9.8□□□□□ -0.84
SYNPO2-204ENST00000448416 SDR42E2A6NKP2 422 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PSTPIP1O43586 416 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PPP1R11O60927 126 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PROSCO94903 275 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PTP4A2Q12974 167 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ALCAMQ13740 583 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 FNBP1LQ5T0N5 605 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 CDHR3Q6ZTQ4 885 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 FASTKD5Q7L8L6 764 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ADGRF4Q8IZF3 695 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 FBXW8Q8N3Y1 598 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 EXD1Q8NHP7 514 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 DHRS1Q96LJ7 313 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 DCUN1D5Q9BTE7 237 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 APOL6Q9BWW8 343 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 TRNAU1APQ9NX07 287 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 KAT6AQ92794 2004 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 A0A1B0GTW7 788 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 FOXD2O60548 495 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 OXSR1O95747 527 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 EIF6P56537 245 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 NFX1Q12986 1120 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 WDR75Q8IWA0 830 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ITPKCQ96DU7 683 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 NLRP4Q96MN2 994 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 TMEM121Q9BTD3 319 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 MINPP1Q9UNW1 487 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 APOBEC2Q9Y235 224 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 NFASCO94856 1347 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 SPATA31A5Q5VU36 1347 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 SPATA31A6Q5VVP1 1343 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 SPATA31A7Q8IWB4 1347 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ZNF12P17014 697 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PSMC3P17980 439 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 CDH3P22223 829 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 HMOX2P30519 316 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 MXI1P50539 228 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 BCL2A1Q16548 175 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 CLEC16AQ2KHT3 1053 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ODR4Q5SWX8 454 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms