RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 IZUMO1Q8IYV9 350 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 SPARTQ8N0X7 666 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 CYP2W1Q8TAV3 490 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 GLG1Q92896 1179 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 C18orf8Q96DM3 657 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 SORCS2Q96PQ0 1159 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 FAM83DQ9H4H8 585 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 HEYLQ9NQ87 328 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 EHD3Q9NZN3 535 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 COMMD10Q9Y6G5 202 aa5.41□□□□□ -1.54
HMGB3P6-201ENST00000444896 A1L4Q6 167 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 FAM234BA2RU67 622 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 SLC16A3O15427 465 aaKnown RBP5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 TLR5O60602 858 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 RAMP2O60895 175 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 VNN1O95497 513 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 HGFP14210 728 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 PROZP22891 400 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 PCSK6P29122 969 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 ATICP31939 592 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 PLA2G5P39877 138 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 MAPK10P53779 464 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 TREML2Q5T2D2 321 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 CERCAMQ5T4B2 595 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 KAZNQ674X7 775 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 RAP1GAP2Q684P5 730 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 C1orf228Q6PIY5 440 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 CRTC1Q6UUV9 634 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 USP49Q70CQ1 688 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 AMER2Q8N7J2 671 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 FANCBQ8NB91 859 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 SUPT20HQ8NEM7 779 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 ZNF384Q8TF68 577 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 OSCP1Q8WVF1 389 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 CAVIN3Q969G5 261 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 PDLIM2Q96JY6 352 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 PBKQ96KB5 322 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 FAM227BQ96M60 508 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 C17orf80Q9BSJ5 609 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 TTPALQ9BTX7 342 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 ALG8Q9BVK2 526 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 TTLL2Q9BWV7 592 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 STK33Q9BYT3 514 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 MAGEB5Q9BZ81 275 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 ARFGAP3Q9NP61 516 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 RGL1Q9NZL6 768 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 VPS51Q9UID3 782 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 ING1Q9UK53 422 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 HPSEQ9Y251 543 aa5.4□□□□□ -1.54
HMGB3P6-201ENST00000444896 IL6RP08887 468 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 NR2F6P10588 404 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 JUPP14923 745 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 CLCN2P51788 898 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 INHBCP55103 352 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 TIAL1Q01085 375 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 STK3Q13188 491 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 BMPR2Q13873 1038 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZNF169Q14929 603 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 NBPF8Q3BBV2 869 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 PCSK4Q6UW60 755 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 PEG10Q86TG7 708 aaKnown RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 SYTL1Q8IYJ3 562 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 VPS37AQ8NEZ2 397 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 SMCR8Q8TEV9 937 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 TMEM41AQ96HV5 264 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 SNX27Q96L92 541 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 PRRX2Q99811 253 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 ARPC5LQ9BPX5 153 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 EIF2AQ9BY44 585 aaKnown RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 PCED1AQ9H1Q7 454 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 TOR3AQ9H497 397 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 GLOD4Q9HC38 313 aa5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZMYND8Q9ULU4 1186 aaPredicted RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 WDR33Q9C0J8 1336 aaKnown RBP5.39□□□□□ -1.55
HMGB3P6-201ENST00000444896 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 GCP02774 474 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 FESP07332 822 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZFXP17010 805 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 TYRP1P17643 537 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 NTSR1P30989 418 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 PRKAR1BP31321 381 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 GRIA3P42263 894 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 TECP42680 631 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 PGDP52209 483 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 TIRAPP58753 221 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 MRPS35P82673 323 aaKnown RBP5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 CHAF1AQ13111 956 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 ZNF618Q5T7W0 954 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 MRGPRGQ86SM5 289 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 CCDC150Q8NCX0 1101 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 ATRIPQ8WXE1 791 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 R3HDM4Q96D70 268 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 CRB3Q9BUF7 120 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 PCDHAC1Q9H158 963 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 TM7SF3Q9NS93 570 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 SERTAD4Q9NUC0 356 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 PACSIN3Q9UKS6 424 aa5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 DRG1Q9Y295 367 aaKnown RBP5.38□□□□□ -1.55
HMGB3P6-201ENST00000444896 CEP83Q9Y592 693 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms