RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 TRIM66O15016 1216 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 BMP6P22004 513 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 ORC1Q13415 861 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 CCINQ13939 588 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 TRIM68Q6AZZ1 485 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 Q6ZS52 159 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 RIN3Q8TB24 985 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 TNIP3Q96KP6 325 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 SPATA17Q96L03 361 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 MED10Q9BTT4 135 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 ZNF518BQ9C0D4 1074 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 ELOVL4Q9GZR5 314 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 NIF3L1Q9GZT8 377 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 EBF3Q9H4W6 596 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 APOBEC3GQ9HC16 384 aaKnown RBP14.89□□□□□ -0.03
TREX1-202ENST00000444177 TRPC7Q9HCX4 862 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 NCDNQ9UBB6 729 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 HMGXB4Q9UGU5 601 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 SMG5Q9UPR3 1016 aaKnown RBP14.89□□□□□ -0.03
TREX1-202ENST00000444177 PTPRDP23468 1912 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 DENND4CQ5VZ89 1909 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 SDK1Q7Z5N4 2213 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 DCHS1Q96JQ0 3298 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 ZNF638Q14966 1978 aaKnown RBP14.89□□□□□ -0.03
TREX1-202ENST00000444177 ATP8B3O60423 1300 aa14.89□□□□□ -0.03
TREX1-202ENST00000444177 BICDL2A1A5D9 508 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 USP17L7P0C7H9 530 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 NDST1P52848 882 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 STX17P56962 302 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 FOXK2Q01167 660 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 PAK1Q13153 545 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 CCDC40Q4G0X9 1142 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
TREX1-202ENST00000444177 SYNPOQ8N3V7 929 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 TRIML1Q8N9V2 468 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 CEP295NLQ96MC4 621 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 CEP63Q96MT8 703 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 SLC22A12Q96S37 553 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 B3GNT5Q9BYG0 378 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 GCNT4Q9P109 453 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 ARMCX3Q9UH62 379 aaPredicted RBP14.88□□□□□ -0.03
TREX1-202ENST00000444177 OBSL1O75147 1896 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 SPTBN2O15020 2390 aa14.88□□□□□ -0.03
TREX1-202ENST00000444177 TRAV19A0A0A6YYK7 116 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 C2orf78A6NCI8 922 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 PPP1R3GB7ZBB8 358 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 F8VP50 259 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 K7ESF4 209 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 PAPSS2O95340 614 aaPredicted RBP14.87□□□□□ -0.03
TREX1-202ENST00000444177 ARSAP15289 507 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 HDCP19113 662 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CD58P19256 250 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 TRIM21P19474 475 aaKnown RBP14.87□□□□□ -0.03
TREX1-202ENST00000444177 CACNA2D1P54289 1103 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 USP46P62068 366 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 DMWDQ09019 674 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 PDGFRLQ15198 375 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CBWD6Q4V339 395 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CBWD3Q5JTY5 395 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CBWD5Q5RIA9 395 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 TTI2Q6NXR4 508 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 DENND5BQ6ZUT9 1274 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 ACOT1Q86TX2 421 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 FAM35AQ86V20 835 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 ARL14EPQ8N8R7 260 aaPredicted RBP14.87□□□□□ -0.03
TREX1-202ENST00000444177 FBXL13Q8NEE6 735 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 SEMA4DQ92854 862 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 RMDN1Q96DB5 314 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CHFRQ96EP1 664 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 DUSP9Q99956 384 aaKnown RBP14.87□□□□□ -0.03
TREX1-202ENST00000444177 C2orf42Q9NWW7 574 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 RAB20Q9NX57 234 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 KIAA1468Q9P260 1216 aa14.87□□□□□ -0.03
TREX1-202ENST00000444177 CHURC1-FNTBB4DL54 471 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 TRDMT1O14717 391 aaKnown RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 MBD3O95983 291 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 CKMP06732 381 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 CCDC130P13994 396 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 FNTBP49356 437 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 AMPD2Q01433 879 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 GRSF1Q12849 480 aaKnown RBP eCLIP14.86□□□□□ -0.03
TREX1-202ENST00000444177 IFRD2Q12894 506 aaPredicted RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 MTF1Q14872 753 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 TMEM196Q5HYL7 178 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 FSTL4Q6MZW2 842 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 FILIP1Q7Z7B0 1213 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 UNC93AQ86WB7 457 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 TTC16Q8NEE8 873 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 SECISBP2LQ93073 1101 aaKnown RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 C8orf48Q96LL4 319 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 CLSTN2Q9H4D0 955 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 CYP3A43Q9HB55 503 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 METTL14Q9HCE5 456 aaKnown RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 FBRSL1Q9HCM7 1045 aaKnown RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 KRT82Q9NSB4 513 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 FAM49BQ9NUQ9 324 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 DUS2Q9NX74 493 aaKnown RBP14.86□□□□□ -0.03
TREX1-202ENST00000444177 ATG2BQ96BY7 2078 aa14.86□□□□□ -0.03
TREX1-202ENST00000444177 NCOR2Q9Y618 2525 aa14.85□□□□□ -0.03
TREX1-202ENST00000444177 HRO43593 1189 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms