RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 LAMTOR5O43504 91 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 ARSAP15289 507 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 PAK1Q13153 545 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 ZNF77Q15935 545 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 C1orf228Q6PIY5 440 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 TXNDC11Q6PKC3 985 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 SLC35C1Q96A29 364 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 CLDN23Q96B33 292 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 SMOQ99835 787 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 DUSP9Q99956 384 aaKnown RBP22.32■■□□□ 1.16
CDKN3-204ENST00000442975 METTL14Q9HCE5 456 aaKnown RBP22.32■■□□□ 1.16
CDKN3-204ENST00000442975 HPS4Q9NQG7 708 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 SMPD4Q9NXE4 827 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 ARHGAP26Q9UNA1 814 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 WNT6Q9Y6F9 365 aa22.32■■□□□ 1.16
CDKN3-204ENST00000442975 NUP210Q8TEM1 1887 aaPredicted RBP22.32■■□□□ 1.16
CDKN3-204ENST00000442975 COL4A2P08572 1712 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 RPS9P46781 194 aaKnown RBP22.31■■□□□ 1.16
CDKN3-204ENST00000442975 PPP3CCP48454 512 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 IFNAR2P48551 515 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 PDGFRLQ15198 375 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 RALGPS2Q86X27 583 aaPredicted RBP22.31■■□□□ 1.16
CDKN3-204ENST00000442975 PDZD8Q8NEN9 1154 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 FAM83CQ9BQN1 747 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 LMAN1LQ9HAT1 526 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 CISHQ9NSE2 258 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 GMIPQ9P107 970 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 MYO15AQ9UKN7 3530 aa22.31■■□□□ 1.16
CDKN3-204ENST00000442975 TICRRQ7Z2Z1 1910 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 BEST1O76090 585 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 MLLT6P55198 1093 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-204ENST00000442975 MCCD1P59942 119 aaPredicted RBP22.3■■□□□ 1.16
CDKN3-204ENST00000442975 RUNX3Q13761 415 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 PON2Q15165 354 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 ZNF687Q8N1G0 1237 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 ZMIZ2Q8NF64 920 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 WHAMMQ8TF30 809 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 CYFIP2Q96F07 1278 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 DUS2Q9NX74 493 aaKnown RBP22.3■■□□□ 1.16
CDKN3-204ENST00000442975 CPQQ9Y646 472 aa22.3■■□□□ 1.16
CDKN3-204ENST00000442975 TNFRSF10BO14763 440 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 GFRA3O60609 400 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 NBL1P41271 181 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 LRMPQ12912 555 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 MTAPQ13126 283 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 LRRC32Q14392 662 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 FILIP1Q7Z7B0 1213 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 CPA6Q8N4T0 437 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 TTC39CQ8N584 583 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 TRIML1Q8N9V2 468 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 OSCP1Q8WVF1 389 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 TATDN2Q93075 761 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 HEXIM2Q96MH2 286 aaKnown RBP22.29■■□□□ 1.16
CDKN3-204ENST00000442975 HNRNPABQ99729 332 aaKnown RBP22.29■■□□□ 1.16
CDKN3-204ENST00000442975 CHRDQ9H2X0 955 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 RBM12Q9NTZ6 932 aaKnown RBP22.29■■□□□ 1.16
CDKN3-204ENST00000442975 KIAA1468Q9P260 1216 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 R4GN57 208 aa22.29■■□□□ 1.16
CDKN3-204ENST00000442975 LEFTY2O00292 366 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 SCAMP3O14828 347 aaKnown RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 OAS1P00973 400 aaKnown RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 SP9P0CG40 484 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 MBL2P11226 248 aaPredicted RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 PFKLP17858 780 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 FMO5P49326 533 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 CSTF1Q05048 431 aaKnown RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 FZD5Q13467 585 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 CUL2Q13617 745 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 CLEC20AQ6ZU45 233 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 GPRIN1Q7Z2K8 1008 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 MAML2Q8IZL2 1156 aaPredicted RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 OVCA2Q8WZ82 227 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 ATP2A3Q93084 1043 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 NACA2Q9H009 215 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 RNF38Q9H0F5 515 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 CSNK1G1Q9HCP0 422 aa22.28■■□□□ 1.16
CDKN3-204ENST00000442975 CHORDC1Q9UHD1 332 aaPredicted RBP22.28■■□□□ 1.16
CDKN3-204ENST00000442975 F5P12259 2224 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 OTOL1A6NHN0 477 aaPredicted RBP22.27■■□□□ 1.16
CDKN3-204ENST00000442975 CHRNB1P11230 501 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 SLC7A9P82251 487 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 HECTD3Q5T447 861 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 Q6ZS52 159 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 NKD2Q969F2 451 aaPredicted RBP22.27■■□□□ 1.16
CDKN3-204ENST00000442975 TMEM176AQ96HP8 235 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 FAXDC2Q96IV6 333 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 COQ4Q9Y3A0 265 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 PTPRDP23468 1912 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 DMDP11532 3685 aa22.27■■□□□ 1.16
CDKN3-204ENST00000442975 CYP26A1O43174 497 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 OLFM2O95897 454 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 ZXDBP98169 803 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 PPP1R26Q5T8A7 1209 aaPredicted RBP22.26■■□□□ 1.15
CDKN3-204ENST00000442975 FOXR2Q6PJQ5 311 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 ZC3H14Q6PJT7 736 aaKnown RBP22.26■■□□□ 1.15
CDKN3-204ENST00000442975 TSSK4Q6SA08 328 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 FBXO44Q9H4M3 255 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 CCSER2Q9H7U1 834 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 ECT2Q9H8V3 914 aa22.26■■□□□ 1.15
CDKN3-204ENST00000442975 CFAP97Q9P2B7 532 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms