RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 NUP93Q8N1F7 819 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 FAM160A2Q8N612 972 aaPredicted RBP12.52□□□□□ -0.41
TTC28-203ENST00000442232 KIAA1958Q8N8K9 716 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 C12orf50Q8NA57 414 aaPredicted RBP12.52□□□□□ -0.41
TTC28-203ENST00000442232 ZNF516Q92618 1163 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 PAGE5Q96GU1 130 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 CCDC34Q96HJ3 373 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 HHIPQ96QV1 700 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 IMPG2Q9BZV3 1241 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 ZNF518BQ9C0D4 1074 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
TTC28-203ENST00000442232 C2orf42Q9NWW7 574 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 RCOR1Q9UKL0 485 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 CPQQ9Y646 472 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.52□□□□□ -0.41
TTC28-203ENST00000442232 EML5Q05BV3 1969 aa12.52□□□□□ -0.41
TTC28-203ENST00000442232 DCHS1Q96JQ0 3298 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
TTC28-203ENST00000442232 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 MED19A0JLT2 244 aaPredicted RBP12.51□□□□□ -0.41
TTC28-203ENST00000442232 ZNF840PA6NDX5 716 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 CLDN5O00501 218 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 PDXKO00764 312 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 AXIN1O15169 862 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 AKAP3O75969 853 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 APBB3O95704 486 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 ADH1CP00326 375 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 NR3C1P04150 777 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 PIK3CAP42336 1068 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 ATXN1P54253 815 aaKnown RBP12.51□□□□□ -0.41
TTC28-203ENST00000442232 SLC7A9P82251 487 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 TAF10Q12962 218 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 DMC1Q14565 340 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 ELF2Q15723 593 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 KMT5BQ4FZB7 885 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 AASDHQ4L235 1098 aaPredicted RBP12.51□□□□□ -0.41
TTC28-203ENST00000442232 CEP135Q66GS9 1140 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 FAM35AQ86V20 835 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 KIAA0895Q8NCT3 520 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 OVCA2Q8WZ82 227 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 TAF4BQ92750 862 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 LOXL4Q96JB6 756 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 B3GNT5Q9BYG0 378 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 NACA2Q9H009 215 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 XYLT2Q9H1B5 865 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 SMPD4Q9NXE4 827 aa12.51□□□□□ -0.41
TTC28-203ENST00000442232 KLRC4O43908 158 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 AP1G2O75843 785 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 EPN2O95208 641 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 OAS1P00973 400 aaKnown RBP12.5□□□□□ -0.41
TTC28-203ENST00000442232 RPN1P04843 607 aaKnown RBP12.5□□□□□ -0.41
TTC28-203ENST00000442232 TGM1P22735 817 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 CMA1P23946 247 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 SYKP43405 635 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 SEC13P55735 322 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 STK4Q13043 487 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 PKP1Q13835 747 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 SGSM1Q2NKQ1 1148 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 CCDC150Q8NCX0 1101 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 TSTD1Q8NFU3 115 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 LINC00597Q9H2U6 94 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 FBRSL1Q9HCM7 1045 aaKnown RBP12.5□□□□□ -0.41
TTC28-203ENST00000442232 KRT82Q9NSB4 513 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 CFAP97Q9P2B7 532 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 TBC1D14Q9P2M4 693 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 SH3BP1Q9Y3L3 701 aa12.5□□□□□ -0.41
TTC28-203ENST00000442232 DCDC2BA2VCK2 349 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 RHOBTB1O94844 696 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 C4BPAP04003 597 aaKnown RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 APODP05090 189 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 CYP17A1P05093 508 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 KRT13P13646 458 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 KCNA4P22459 653 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 DGKEP52429 567 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 SLC5A3P53794 718 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 CACNA2D1P54289 1103 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 CDH8P55286 799 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 PREPLQ4J6C6 727 aaPredicted RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 HECTD3Q5T447 861 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 ACOT1Q86TX2 421 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 C11orf74Q86VG3 221 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 DDX1Q92499 740 aaKnown RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 GZF1Q9H116 711 aaPredicted RBP12.49□□□□□ -0.41
TTC28-203ENST00000442232 ARRDC1-AS1Q9H2J1 176 aa12.49□□□□□ -0.41
TTC28-203ENST00000442232 KCTD10Q9H3F6 313 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms