RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ANKRD63C9JTQ0 380 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 OPA1O60313 960 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 MTA2O94776 668 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRIM49P0CI25 452 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRIM49CP0CI26 452 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 CTSAP10619 480 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 EPCAMP16422 314 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 IFNAR2P48551 515 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 PEX5P50542 639 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 GSCP56915 257 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 UBXN2BQ14CS0 331 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 QPCTQ16769 361 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 MAP4K3Q8IVH8 894 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 STKLD1Q8NE28 680 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZNF317Q96PQ6 595 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 DEF6Q9H4E7 631 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 SFXN1Q9H9B4 322 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TRPM5Q9NZQ8 1165 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 SH3BP1Q9Y3L3 701 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 MTCH2Q9Y6C9 303 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 COL11A1P12107 1806 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 A6NNZ2 444 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 HMGB1P1B2RPK0 211 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 SPTLC1O15269 473 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 PMM2O15305 246 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 NCAM2O15394 837 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 CNPP09543 421 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 OR4Q2P0C623 313 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 PTPN2P17706 415 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 FSHRP23945 695 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 LHX1P48742 406 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 CBX2Q14781 532 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TUBB8Q3ZCM7 444 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 WSCD1Q658N2 575 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 GRASPQ7Z6J2 395 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 DDX53Q86TM3 631 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 DDX42Q86XP3 938 aaKnown RBP eCLIP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 PLEKHO2Q8TD55 490 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 BCAS4Q8TDM0 211 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZNF473Q8WTR7 871 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 ATXN2LQ8WWM7 1075 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 ARHGEF26Q96DR7 871 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 CASD1Q96PB1 797 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 AGPAT3Q9NRZ7 376 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 LMCD1Q9NZU5 365 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 ARHGAP28Q9P2N2 729 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 RAB23Q9ULC3 237 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 PLAAQ9Y263 795 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 MGAMO43451 1857 aa7.77□□□□□ -1.17
CDC42BPA-208ENST00000442054 TEX28O15482 410 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM107AO95990 144 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 NFICP08651 508 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 CTNNA2P26232 953 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TKTP29401 623 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 PSMC1P62191 440 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 KLHL30Q0D2K2 578 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ASIC2Q16515 512 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 CCDC142Q17RM4 750 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TDRD12Q587J7 1177 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TDRD10Q5VZ19 366 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TTC19Q6DKK2 380 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ATAD1Q8NBU5 361 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ALG3Q92685 438 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 OSGEPQ9NPF4 335 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TAS2R14Q9NYV8 317 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 TUBGCP4Q9UGJ1 667 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 GTF3C4Q9UKN8 822 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 STRIP2Q9ULQ0 834 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZSWIM8A7E2V4 1837 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 SYNJ2BP-COX16A0A087WUM0 186 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 OR6C75A6NL08 312 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 HIDE1A8MVS5 230 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ZBTB42B2RXF5 422 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 NUDT17P0C025 328 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 GABRR2P28476 465 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 DRG2P55039 364 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 CYP1B1Q16678 543 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 LACTB2Q53H82 288 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 AGBL2Q5U5Z8 902 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ALKBH5Q6P6C2 394 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 SPRED2Q7Z698 418 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 PABPC5Q96DU9 382 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 MKNK1Q9BUB5 465 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 GPR62Q9BZJ7 368 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM49BQ9NUQ9 324 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 COX16Q9P0S2 106 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 LSM7Q9UK45 103 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 UBE4BO95155 1302 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 KIAA1217Q5T5P2 1943 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 GON4LQ3T8J9 2241 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 FAM170AA1A519 330 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 VGLL3A8MV65 326 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 MEFVO15553 781 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 LRRN2O75325 713 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 RFPL2O75678 378 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 NR1D1P20393 614 aa7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 HOXA11P31270 313 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-208ENST00000442054 ADGRE1Q14246 886 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms