RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 HADHBP55084 474 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TNNC1P63316 161 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TCEAL1Q15170 157 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LIN9Q5TKA1 542 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 C11orf63Q6NUN7 778 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TOP6BLQ8N6T0 577 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LRRC57Q8N9N7 239 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SMRP1Q8NCR6 262 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PBKQ96KB5 322 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MMS19Q96T76 1030 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SELENOOQ9BVL4 669 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 S1PR5Q9H228 398 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 OSGEPQ9NPF4 335 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 DZANK1Q9NVP4 752 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 DDX43Q9NXZ2 648 aaKnown RBP15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 UVRAGQ9P2Y5 699 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CEP83Q9Y592 693 aa15.37■□□□□ 0.05
TNFRSF1A-204ENST00000440083 XIRP2A4UGR9 3374 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ARHGEF37A1IGU5 675 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 OR6C75A6NL08 312 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CES2O00748 559 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 BUB1BO60566 1050 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 STAU1O95793 577 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CALCAP01258 141 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 C8AP07357 584 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 IL9P15248 144 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CXCR5P32302 372 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZNF132P52740 706 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CDH8P55286 799 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MRPS5P82675 430 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SMAD4Q13485 552 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CFAP221Q4G0U5 840 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 NAA35Q5VZE5 725 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PTCRAQ6ISU1 281 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SLFN11Q7Z7L1 901 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LRRTM3Q86VH5 581 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TTC9BQ8N6N2 239 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SLC7A14Q8TBB6 771 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZCWPW1Q9H0M4 648 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SFXN1Q9H9B4 322 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CYP3A43Q9HB55 503 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TMLHEQ9NVH6 421 aa15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CNOT8Q9UFF9 292 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PACSIN2Q9UNF0 486 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 USP15Q9Y4E8 981 aaPredicted RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MTCL1Q9Y4B5 1905 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TCF20Q9UGU0 1960 aaKnown RBP15.36■□□□□ 0.05
TNFRSF1A-204ENST00000440083 C2orf16Q68DN1 1984 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 UNC80Q8N2C7 3258 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 KCNK3O14649 394 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 GABRDO14764 452 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ATMINO43313 823 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MBTPS2O43462 519 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MED7O43513 233 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ATP2C2O75185 946 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MTA2O94776 668 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ABLIM3O94929 683 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CYP1A1P04798 512 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CYP1A2P05177 515 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PDGFRBP09619 1106 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 WARSP23381 471 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LMO2P25791 158 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PSMC1P62191 440 aaKnown RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CENPCQ03188 943 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ADCY1Q08828 1119 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 C2orf54Q08AI8 447 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SLC39A12Q504Y0 691 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 PASD1Q8IV76 773 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 THEM5Q8N1Q8 247 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TMEM86AQ8N2M4 240 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 TTC39CQ8N584 583 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ATAD1Q8NBU5 361 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZNF564Q8TBZ8 553 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 COG1Q8WTW3 980 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZNF707Q96C28 371 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ASB2Q96Q27 587 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 BCO2Q9BYV7 579 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 VRTNQ9H8Y1 702 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CYP4F11Q9HBI6 524 aa15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 AVENQ9NQS1 362 aaPredicted RBP15.35■□□□□ 0.05
TNFRSF1A-204ENST00000440083 MTMR11A4FU01 709 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CCL16O15467 120 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZMYND10O75800 440 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 SOAT2O75908 522 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 LSM8O95777 96 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 UNGP13051 313 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 CD19P15391 556 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 HOXB8P17481 243 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 BRD2P25440 801 aaKnown RBP15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 NOMO3P69849 1222 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 GPR17Q13304 367 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ORC1Q13415 861 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZNF394Q53GI3 561 aa15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 ZNF572Q7Z3I7 529 aaPredicted RBP15.34■□□□□ 0.05
TNFRSF1A-204ENST00000440083 NT5DC3Q86UY8 548 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms