RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 TMEM132DQ14C87 1099 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PSMD5Q16401 504 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ZNF394Q53GI3 561 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 HOOK3Q86VS8 718 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TTC9BQ8N6N2 239 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ATAD1Q8NBU5 361 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 OR5B17Q8NGF7 314 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CASKIN2Q8WXE0 1202 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SHC3Q92529 594 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 VCPIP1Q96JH7 1222 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ZIM3Q96PE6 472 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FNBP1Q96RU3 617 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 KRT12Q99456 494 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PI4K2AQ9BTU6 479 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TTPALQ9BTX7 342 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 COLEC11Q9BWP8 271 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RHOBTB2Q9BYZ6 727 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TXLNGYQ9BZA5 131 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FAM124BQ9H5Z6 455 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CYP4F11Q9HBI6 524 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CLEC1BQ9P126 229 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FEZ2Q9UHY8 353 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GTF3C4Q9UKN8 822 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TFR2Q9UP52 801 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 AGAP1Q9UPQ3 857 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 USP15Q9Y4E8 981 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SNX9Q9Y5X1 595 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 STYXL1Q9Y6J8 313 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PLXNA4Q9HCM2 1894 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FREM2Q5SZK8 3169 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GRXCR2A6NFK2 248 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 KRIT1O00522 736 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SPTLC1O15269 473 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 OGTO15294 1046 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TGM5O43548 720 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 NCK2O43639 380 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PHF2O75151 1096 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 FTCDO95954 541 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RB1P06400 928 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TRIM49P0CI25 452 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 TRIM49CP0CI26 452 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 PSMC1P62191 440 aaKnown RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ADCY1Q08828 1119 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SLMAPQ14BN4 828 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 USP41Q3LFD5 358 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 DCAF4L1Q3SXM0 396 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CTXN3Q4LDR2 81 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 KRT39Q6A163 491 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 GRASPQ7Z6J2 395 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 DAAM2Q86T65 1068 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 CNPY4Q8N129 248 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SLC35G2Q8TBE7 412 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 ERLEC1Q96DZ1 483 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SEPT5Q99719 369 aaPredicted RBP5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RASSF4Q9H2L5 321 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 POMKQ9H5K3 350 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 EPHX3Q9H6B9 360 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 HSPBP1Q9NZL4 362 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 RWDD3Q9Y3V2 267 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 NLRC5Q86WI3 1866 aa5.02□□□□□ -1.61
EDEM3-203ENST00000439962 SF3B1O75533 1304 aaKnown RBP eCLIP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PTPRJQ12913 1337 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 A0A087WUV0 522 aaPredicted RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 EBAG9O00559 213 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CEP104O60308 925 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 LDHAP00338 332 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 GLUD1P00367 558 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MYZAPP0CAP1 466 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 BMP1P13497 986 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CD72P21854 359 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ECHS1P30084 290 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CTNNA1P35221 906 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 RAP1GAPP47736 663 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 DLG4P78352 724 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 UPP1Q16831 310 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 DUPD1Q68J44 220 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SPOPLQ6IQ16 392 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 CES5AQ6NT32 575 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 MRPL10Q7Z7H8 261 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 HOMEZQ8IX15 550 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 GJD3Q8N144 294 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PLCD3Q8N3E9 789 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 BBOF1Q8ND07 529 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 GIPC2Q8TF65 315 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 HDAC7Q8WUI4 952 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PIK3R5Q8WYR1 880 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PABPC5Q96DU9 382 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PGM2Q96G03 612 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 SNX27Q96L92 541 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PACSIN1Q9BY11 444 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ROPN1BQ9BZX4 212 aaPredicted RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 EPN3Q9H201 632 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ROPN1Q9HAT0 212 aaPredicted RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 PTPRHQ9HD43 1115 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 ABI2Q9NYB9 513 aaPredicted RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NFU1Q9UMS0 254 aa5.01□□□□□ -1.61
EDEM3-203ENST00000439962 RRP15Q9Y3B9 282 aaKnown RBP5.01□□□□□ -1.61
EDEM3-203ENST00000439962 NFS1Q9Y697 457 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms