RNA–Protein interactions for RNA: ENST00000439476.6

BDNF-211, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-211ENST00000439476 CD53P19397 219 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 MMP13P45452 471 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 RECQLP46063 649 aaPredicted RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 PCYT1AP49585 367 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 HSD17B4P51659 736 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 DRG2P55039 364 aaKnown RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 MAP3K7CLP57077 242 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 LRRC36Q1X8D7 754 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 PPP6R3Q5H9R7 873 aaPredicted RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 TTC23LQ6PF05 361 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 PATL1Q86TB9 770 aaKnown RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 ZNF554Q86TJ5 538 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 KIAA1958Q8N8K9 716 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 LZICQ8WZA0 190 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 LPAR1Q92633 364 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 IFT43Q96FT9 208 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 VPS50Q96JG6 964 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 TMEM237Q96Q45 408 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 SENP7Q9BQF6 1050 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 THTPAQ9BU02 230 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 RTFDC1Q9BY42 306 aaPredicted RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 MANSC1Q9H8J5 431 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 CYP4F11Q9HBI6 524 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 ZNF302Q9NR11 478 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 DCAF16Q9NXF7 216 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 IL1RAPL1Q9NZN1 696 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 PDP2Q9P2J9 529 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 STK39Q9UEW8 545 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 EVLQ9UI08 416 aaPredicted RBP6.61□□□□□ -1.35
BDNF-211ENST00000439476 PCDHB2Q9Y5E7 798 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 MRC1P22897 1456 aa6.61□□□□□ -1.35
BDNF-211ENST00000439476 H2AFYO75367 372 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 KRT8P05787 483 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PRKACBP22694 351 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CPA2P48052 419 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RAD51Q06609 339 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 SHROOM1Q2M3G4 852 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 ANO4Q32M45 955 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RABGAP1LQ5R372 815 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 KIAA1841Q6NSI8 718 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 C4orf50Q6ZRC1 276 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ZNF720Q7Z2F6 126 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ZBTB33Q86T24 672 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 GRAMD2AQ8IUY3 354 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 LRRC43Q8N309 656 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 STX19Q8N4C7 294 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 LNX1Q8TBB1 728 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 GTF3C2Q8WUA4 911 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 HAS1Q92839 578 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 UROC1Q96N76 676 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RIT2Q99578 217 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 NAT9Q9BTE0 207 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CEP44Q9C0F1 390 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TDRD3Q9H7E2 651 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 EURLQ9NYK6 297 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MPP6Q9NZW5 540 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TMCO1Q9UM00 188 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CDY2AQ9Y6F7 541 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CDY1Q9Y6F8 540 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 AFDNP55196 1824 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 TNPO2O14787 897 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 GAS2O43903 313 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 ATP5BP06576 529 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 CYP11B1P15538 503 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ACADSBP45954 432 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ALDH18A1P54886 795 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 MXD4Q14582 209 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 TTLL4Q14679 1199 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 C2CD6Q53TS8 623 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 XKR3Q5GH77 459 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 FOXR2Q6PJQ5 311 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PRR23CQ6ZRP0 262 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MTDHQ86UE4 582 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 OSTM1Q86WC4 334 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 APOBEC3FQ8IUX4 373 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 LILRB2Q8N423 598 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PRELID2Q8N945 189 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TBC1D16Q8TBP0 767 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CKAP2Q8WWK9 683 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 NCLNQ969V3 563 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MAML3Q96JK9 1138 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PI4K2AQ9BTU6 479 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RSAD1Q9HA92 442 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ARHGEF38Q9NXL2 777 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 TAS2R14Q9NYV8 317 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 RBAKQ9NYW8 714 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 GTSE1Q9NYZ3 720 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CTNNAL1Q9UBT7 734 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 MARCOQ9UEW3 520 aaPredicted RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 SEPT3Q9UH03 358 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 AGO2Q9UKV8 859 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 NFAT5O94916 1531 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 ADAMTS3O15072 1205 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 IL18RAPO95256 599 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CYP2C8P10632 490 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 CALB2P22676 271 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 PTPN4P29074 926 aa6.6□□□□□ -1.35
BDNF-211ENST00000439476 YWHABP31946 246 aaKnown RBP6.6□□□□□ -1.35
BDNF-211ENST00000439476 RFC5P40937 340 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms