RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SLC35F5Q8WV83 523 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 NGRNQ9NPE2 291 aaKnown RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 GPATCH2LQ9NWQ4 482 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 SHOC2Q9UQ13 582 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 MANSC4A6NHS7 340 aaPredicted RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 GOLGA8MH3BSY2 632 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 PIRO00625 290 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 SPTLC1O15269 473 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 TCEA3O75764 348 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 GABBR2O75899 941 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 CD4P01730 458 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 FGFR1P11362 822 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 ATP5DP30049 168 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 RGS2P41220 211 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 CTCFP49711 727 aaPredicted RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 SLC6A3Q01959 620 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 SCYL2Q6P3W7 929 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 UNC45BQ8IWX7 931 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 C10orf67Q8IYJ2 551 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 TAB3Q8N5C8 712 aaPredicted RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 KBTBD7Q8WVZ9 684 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 ZNF560Q96MR9 790 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 MAK16Q9BXY0 300 aaKnown RBP16.98■□□□□ 0.31
MBD4-203ENST00000429544 B3GNT5Q9BYG0 378 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 TBK1Q9UHD2 729 aa16.98■□□□□ 0.31
MBD4-203ENST00000429544 DPYSL4O14531 572 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 MCF2LO15068 1137 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 PAPSS1O43252 624 aaPredicted RBP16.97■□□□□ 0.31
MBD4-203ENST00000429544 ABHD2P08910 425 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 CREB1P16220 341 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 SOX4Q06945 474 aaPredicted RBP16.97■□□□□ 0.31
MBD4-203ENST00000429544 DPYSL3Q14195 570 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 KRT81Q14533 505 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 STAT4Q14765 748 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 FSCN1Q16658 493 aaKnown RBP16.97■□□□□ 0.31
MBD4-203ENST00000429544 TMEM110Q86TL2 294 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 CYP4X1Q8N118 509 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 FAM172AQ8WUF8 416 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 APBA2Q99767 749 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 CCDC77Q9BR77 488 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 KATNAL1Q9BW62 490 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 IPPQ9Y573 584 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 KPNA7A9QM74 516 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 LMO2P25791 158 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 SDC4P31431 198 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 RPL22P35268 128 aaKnown RBP16.97■□□□□ 0.31
MBD4-203ENST00000429544 CRYBB1P53674 252 aaPredicted RBP16.97■□□□□ 0.31
MBD4-203ENST00000429544 ZNF618Q5T7W0 954 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 ANKRD22Q5VYY1 191 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 ARHGAP17Q68EM7 881 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 C17orf99Q6UX52 265 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 CAPN12Q6ZSI9 719 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 KHSRPQ92945 711 aaKnown RBP eCLIP16.97■□□□□ 0.31
MBD4-203ENST00000429544 CHMP6Q96FZ7 201 aa16.97■□□□□ 0.31
MBD4-203ENST00000429544 A0A087WUV0 522 aaPredicted RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 NDC80O14777 642 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 BANF1O75531 89 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 ENDOD1O94919 500 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 DRD4P21917 467 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 GNL1P36915 607 aaPredicted RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 GAD2Q05329 585 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 ZBED8Q8IZ13 594 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 FAM71DQ8N9W8 422 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 SPATA18Q8TC71 538 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 CLEC4CQ8WTT0 213 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 TTC25Q96NG3 672 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 PRMT1Q99873 361 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 SNX25Q9H3E2 840 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 LGALS13Q9UHV8 139 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 FARP1Q9Y4F1 1045 aaPredicted RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 XPOTO43592 962 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 RBP3P10745 1247 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 KCNE1P15382 129 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 IFNAR2P48551 515 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 PDIA2Q13087 525 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 ZC3H12AQ5D1E8 599 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 MICALCLQ6ZW33 695 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 CENPUQ71F23 418 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 CPLX4Q7Z7G2 160 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 PCGF5Q86SE9 256 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 SPATS2Q86XZ4 545 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 PPIL6Q8IXY8 311 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 ARRDC4Q8NCT1 418 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 SMG8Q8ND04 991 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 MGARPQ8TDB4 240 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 CPT1BQ92523 772 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 DDX20Q9UHI6 824 aaKnown RBP16.96■□□□□ 0.31
MBD4-203ENST00000429544 NAALADL1Q9UQQ1 740 aa16.96■□□□□ 0.31
MBD4-203ENST00000429544 MYADML2A6NDP7 307 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 C5orf60A6NFR6 353 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
MBD4-203ENST00000429544 CDH16O75309 829 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 TAF6P49848 677 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 PURAQ00577 322 aaKnown RBP16.95■□□□□ 0.3
MBD4-203ENST00000429544 ROR1Q01973 937 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 BST2Q10589 180 aaKnown RBP16.95■□□□□ 0.3
MBD4-203ENST00000429544 TMED2Q15363 201 aa16.95■□□□□ 0.3
MBD4-203ENST00000429544 XKR4Q5GH76 650 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms