RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 SMYD3Q9H7B4 428 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SLC28A3Q9HAS3 691 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 C20orf96Q9NUD7 363 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 DCAF16Q9NXF7 216 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 EMC3Q9P0I2 261 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SUCOQ9UBS9 1254 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 TUBE1Q9UJT0 475 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PCDHA7Q9UN72 937 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PCDHB5Q9Y5E4 795 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CYB561D2O14569 222 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 B3GAT3O94766 335 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 IL33O95760 270 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SLC1A1P43005 524 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 UBE3AQ05086 875 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 C2orf54Q08AI8 447 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 MMRN1Q13201 1228 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ITGA9Q13797 1035 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ESRP1Q6NXG1 681 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 NEK10Q6ZWH5 1172 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 FAM9CQ8IZT9 166 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.94□□□□□ -1.46
HERC4-206ENST00000427635 SUN5Q8TC36 379 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RBBP8Q99708 897 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 TRIM8Q9BZR9 551 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 DCLK3Q9C098 648 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PUS7LQ9H0K6 701 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 FANCFQ9NPI8 374 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CCDC177Q9NQR7 707 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 KLK14Q9P0G3 267 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 ZFATQ9P243 1243 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RWDD3Q9Y3V2 267 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 N6AMT1Q9Y5N5 214 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SLC12A8A0AV02 714 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 MAGEC1O60732 1142 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 AVILO75366 819 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RTN3O95197 1032 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 TRIM16O95361 564 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PLEKHA8P1O95397 391 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 CYP2A7P20853 494 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 MAGEA8P43361 318 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 SERPINB10P48595 397 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 NEK2P51955 445 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 BNC1Q01954 994 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 BTKQ06187 659 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 NCOA4Q13772 614 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 KYNUQ16719 465 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 RAVER1Q8IY67 606 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 ST13P4Q8IZP2 240 aaPredicted RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 PAGE5Q96GU1 130 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 VCPKMTQ9H867 229 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.94□□□□□ -1.46
HERC4-206ENST00000427635 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
HERC4-206ENST00000427635 GCC2Q8IWJ2 1684 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 KIF1BO60333 1816 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ADCY3O60266 1144 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 RASGRP1O95267 797 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ACSL3O95573 720 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SLC39A14Q15043 492 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ATP13A4Q4VNC1 1196 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 C6orf10Q5SRN2 563 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SARM1Q6SZW1 724 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 BTNL9Q6UXG8 535 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 DEFB132Q7Z7B7 95 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CYP4X1Q8N118 509 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CYP4Z2PQ8N1L4 340 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CPA6Q8N4T0 437 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 B3GALNT2Q8NCR0 500 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SLC13A1Q9BZW2 595 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PCDHGB7Q9Y5F8 929 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 A0A0G2JND7 137 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PHF20L1A8MW92 1017 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 POTECB2RU33 542 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 INMTO95050 263 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 EYA4O95677 639 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 IGSF6O95976 241 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HIST1H2ABP04908 130 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 MYL2P10916 166 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CLK2P49760 499 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 SP3Q02447 781 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PIGHQ14442 188 aaPredicted RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 PABPC1LQ4VXU2 614 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 HHIPL2Q6UWX4 724 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 C4orf22Q6V702 233 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 LRRC74BQ6ZQY2 392 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 RGS9BPQ6ZS82 235 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HIST3H2AQ7L7L0 130 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 PRUNE1Q86TP1 453 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 ZC3H18Q86VM9 953 aaKnown RBP5.93□□□□□ -1.46
HERC4-206ENST00000427635 NLRP14Q86W24 1093 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 UBR7Q8N806 425 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HIST1H2ACQ93077 130 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 HPDLQ96IR7 371 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CLCC1Q96S66 551 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CCT7Q99832 543 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 CLPBQ9H078 707 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 KLHL28Q9NXS3 571 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 SH3BGRL2Q9UJC5 107 aa5.93□□□□□ -1.46
HERC4-206ENST00000427635 RNF112Q9ULX5 631 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms