RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 ERVK-5Q9HDB9 667 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 CHKBQ9Y259 395 aa16.67■□□□□ 0.26
PKP4-205ENST00000426248 ZNF792Q3KQV3 632 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 MMEL1Q495T6 779 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 PRMT7Q9NVM4 692 aaPredicted RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 DIS3Q9Y2L1 958 aaKnown RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 EXOC1LA0A1B0GW35 172 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 CA12O43570 354 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 GAS2O43903 313 aaKnown RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 SNAI1O95863 264 aaPredicted RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 ADRB2P07550 413 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 ALOX15P16050 662 aaPredicted RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 GALCP54803 685 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 COBLL1Q53SF7 1204 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
PKP4-205ENST00000426248 MORF4L1Q9UBU8 362 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 LZTS1Q9Y250 596 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 SH3GLB1Q9Y371 365 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 RRN3P2A6NIE6 340 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 B4GALT5O43286 388 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 USP1O94782 785 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 FAM163BP0C2L3 166 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 HOXD13P35453 343 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 C4orf50Q6ZRC1 276 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 SATL1Q86VE3 508 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 ABRAQ8N0Z2 381 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
PKP4-205ENST00000426248 PODXLO00592 558 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 LCA5LO95447 670 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SPATA31D3P0C874 917 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SOX5P35711 763 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SKIV2L2P42285 1042 aaKnown RBP16.65■□□□□ 0.26
PKP4-205ENST00000426248 KDSRQ06136 332 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 MFSD10Q14728 455 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 ACSBG2Q5FVE4 666 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SPATA31D4Q6ZUB0 917 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 ZNF554Q86TJ5 538 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SCUBE1Q8IWY4 988 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 CYP4X1Q8N118 509 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 ATL2Q8NHH9 583 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SLC35G2Q8TBE7 412 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 INPP5DQ92835 1189 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 CCDC124Q96CT7 223 aaKnown RBP16.65■□□□□ 0.26
PKP4-205ENST00000426248 CNTRLQ7Z7A1 2325 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 FAM47DPA6NHR8 397 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 FOXN3O00409 490 aaPredicted RBP16.65■□□□□ 0.26
PKP4-205ENST00000426248 ARHGAP1Q07960 439 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 MGAT5Q09328 741 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 NCOA4Q13772 614 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 DHX34Q14147 1143 aaKnown RBP16.65■□□□□ 0.26
PKP4-205ENST00000426248 ZNF699Q32M78 642 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 WDR72Q3MJ13 1102 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 GLRA4Q5JXX5 417 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 C1orf54Q8WWF1 131 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 KATNAL1Q9BW62 490 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 ARHGAP39Q9C0H5 1083 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 OR6B1O95007 311 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 CCNB1P14635 433 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 EDNRBP24530 442 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 PTENP60484 403 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 AP2B1P63010 937 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 HSP90AA5PQ58FG0 334 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SPOPLQ6IQ16 392 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 NAT14Q8WUY8 206 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 THTPAQ9BU02 230 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 TMEM117Q9H0C3 514 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 XPNPEP3Q9NQH7 507 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 SLC45A1Q9Y2W3 748 aa16.65■□□□□ 0.26
PKP4-205ENST00000426248 H3BRJ5 948 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 E2F6O75461 281 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 GARTP22102 1010 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 CCR3P51677 355 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 NCKAP1LP55160 1127 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 GHRHRQ02643 423 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 PRKCZQ05513 592 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 CYP24A1Q07973 514 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 ACAP1Q15027 740 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 DAB2IPQ5VWQ8 1189 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 B3GNT9Q6UX72 402 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 MAML1Q92585 1016 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 PCYT2Q99447 389 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 MTMR12Q9C0I1 747 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 TMEM8AQ9HCN3 771 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 KLK14Q9P0G3 267 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 INPP5FQ9Y2H2 1132 aa16.64■□□□□ 0.26
PKP4-205ENST00000426248 C17orf102A2RUQ5 167 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 BOLA2-SMG1P6H3BVE0 249 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 OGTO15294 1046 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 RARGP13631 454 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 INHBCP55103 352 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 GRB14Q14449 540 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 ZNF667Q5HYK9 610 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 ACAP3Q96P50 834 aa16.64■□□□□ 0.25
PKP4-205ENST00000426248 EDEM3Q9BZQ6 932 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms