RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 IL31RAQ8NI17 732 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 C8orf48Q96LL4 319 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 NT5C1BQ96P26 610 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 AMBRA1Q9C0C7 1298 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF287Q9HBT7 754 aa4□□□□□ -1.77
SDCBPP3-201ENST00000419629 A1CFQ9NQ94 594 aaKnown RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 GEMIN8Q9NWZ8 242 aaKnown RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 AFF4Q9UHB7 1163 aaKnown RBP4□□□□□ -1.77
SDCBPP3-201ENST00000419629 CLIP1P30622 1438 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 RRBP1Q9P2E9 1410 aaKnown RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 A0A087WWL8 130 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 SMIM22K7EJ46 135 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 FOXN3O00409 490 aaPredicted RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 TPP1O14773 563 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 NTN1O95631 604 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 CYP2D6P10635 497 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 MPGP29372 298 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 FOXG1P55316 489 aaPredicted RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 LILRA4P59901 499 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 DMTNQ08495 405 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 BMPR2Q13873 1038 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF618Q5T7W0 954 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 ARHGAP40Q5TG30 622 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 CEP85Q6P2H3 762 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 APOA5Q6Q788 366 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC29A4Q7RTT9 530 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 FAM156AQ8NDB6 213 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 SMCR8Q8TEV9 937 aaPredicted RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 IPCEF1Q8WWN9 437 aaPredicted RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 APIPQ96GX9 242 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 WACQ9BTA9 647 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 C22orf23Q9BZE7 217 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 DPH1Q9BZG8 443 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 MS4A7Q9GZW8 240 aaPredicted RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 NUP62CLQ9H1M0 184 aa3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 MRPS18AQ9NVS2 196 aaKnown RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 DDX20Q9UHI6 824 aaKnown RBP3.99□□□□□ -1.77
SDCBPP3-201ENST00000419629 BAZ1BQ9UIG0 1483 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 MBD3L4A6NDZ8 208 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 MBD3L3A6NE82 208 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 MYO1FO00160 1098 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC16A3O15427 465 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 INMTO95050 263 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 PARNO95453 639 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 MAP4K4O95819 1239 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ONECUT2O95948 504 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 RHOP08100 348 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZFXP17010 805 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZKSCAN1P17029 563 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 RHCEP18577 417 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 KLRC1P26715 233 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 PEX2P28328 305 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 TKTP29401 623 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ALDH9A1P49189 494 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 TOB1P50616 345 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF134P52741 427 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SUMO3P55854 103 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 IRX3P78415 501 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 RHDQ02161 417 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 CTBP1Q13363 440 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 TBCCQ15814 346 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 CNGA2Q16280 664 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 INSCQ1MX18 579 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 PROSER3Q2NL68 480 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 KLHL22Q53GT1 634 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF517Q6ZMY9 492 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZNF804AQ7Z570 1209 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 DTX2Q86UW9 622 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 GAS2L3Q86XJ1 694 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 CNGA4Q8IV77 575 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 CCAR1Q8IX12 1150 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC15A3Q8IY34 581 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 FAM109AQ8N4B1 249 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 FANCBQ8NB91 859 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 FBXO41Q8TF61 875 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 PPP1R9BQ96SB3 815 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 QTRT1Q9BXR0 403 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 CHMP4AQ9BY43 222 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ATP6V0A4Q9HBG4 840 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SACM1LQ9NTJ5 587 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SERTAD4Q9NUC0 356 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 TRMT13Q9NUP7 481 aaKnown RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 SH2B3Q9UQQ2 575 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 NUDCQ9Y266 331 aa3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.98□□□□□ -1.77
SDCBPP3-201ENST00000419629 MAPKBP1O60336 1514 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 FSD2A1L4K1 749 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 TRIM43BA6NCK2 446 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 TISP43B9A030 160 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 PPP6CO00743 305 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 DCLK1O15075 740 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 TBX3O15119 743 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 JTBO76095 146 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 NHLRC4P0CG21 123 aaPredicted RBP3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 MYF5P13349 255 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 PDE6CP51160 858 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 PRKAG1P54619 331 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 SLC20A2Q08357 652 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 BECN1Q14457 450 aa3.97□□□□□ -1.77
SDCBPP3-201ENST00000419629 SUPT20HL1Q3ZLR7 823 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms