RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 GMLQ99445 158 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TINF2Q9BSI4 451 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 KCNF1Q9H3M0 494 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 FBXO44Q9H4M3 255 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TASP1Q9H6P5 420 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 XAB2Q9HCS7 855 aaKnown RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 SCUBE2Q9NQ36 999 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 ALDH1A2O94788 518 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 RHOBTB1O94844 696 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 AGTP01019 485 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 MYL4P12829 197 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 CHRM3P20309 590 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 KLRC2P26717 231 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PON1P27169 355 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 VEGFBP49765 207 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.017e-7■■■■□ 21.4
UBR4-206ENST00000419533 EFEMP1Q12805 493 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PDCLQ13371 301 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 COBLL1Q53SF7 1204 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 BEND6Q5SZJ8 279 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 OVOS1Q6IE37 1185 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 SAPCD2Q86UD0 394 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 NT5DC4Q86YG4 428 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PPIL6Q8IXY8 311 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 CYP4F11Q9HBI6 524 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SNTG2Q9NY99 539 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 SNCAIPQ9Y6H5 919 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 ANGPT2O15123 496 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 H2AFYO75367 372 aaKnown RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 RHOCP08134 193 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 MYL2P10916 166 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 MAP3K7CLP57077 242 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PDE1CQ14123 709 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 SRLQ86TD4 932 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 CBWD1Q9BRT8 395 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 FAF1Q9UNN5 650 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 CCDC78A2IDD5 438 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 GMNCA6NCL1 334 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 GEMIN4P57678 1058 aaKnown RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 HIBCHQ6NVY1 386 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 HIPK4Q8NE63 616 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 HASPINQ8TF76 798 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SEZ6LQ9BYH1 1024 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 SMYD3Q9H7B4 428 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 TMEM51Q9NW97 253 aa8.77□□□□□ -1.01
UBR4-206ENST00000419533 UXTQ9UBK9 157 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 ASTN2O75129 1339 aaPredicted RBP8.77□□□□□ -1.01
UBR4-206ENST00000419533 SYNDIG1LA6NDD5 238 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 ANKRD65E5RJM6 399 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 CDH16O75309 829 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 KRT16P08779 473 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 GHRP10912 638 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 ACADMP11310 421 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 DNAJB2P25686 324 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 IKBKEQ14164 716 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 C1orf146Q5VVC0 180 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 PATL1Q86TB9 770 aaKnown RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 SLC5A5Q92911 643 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 BHMTQ93088 406 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 SYT15Q9BQS2 421 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 ASB7Q9H672 318 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 MLXIPLQ9NP71 852 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 DDX43Q9NXZ2 648 aaKnown RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 PKD2L2Q9NZM6 624 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 PLA2G4CQ9UP65 541 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 ATP6V1E1P36543 226 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 MRNIPQ6NTE8 343 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 HHIPL1Q96JK4 782 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 RANBP17Q9H2T7 1088 aaKnown RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 RNF186Q9NXI6 227 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 RRN3Q9NYV6 651 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 VPS28Q9UK41 221 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 MAP3K13O43283 966 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 POMCP01189 267 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 CXCL8P10145 99 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 CRHR2Q13324 411 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 ZNF284Q2VY69 593 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 TTC39BQ5VTQ0 682 aaPredicted RBP8.76□□□□□ -1.01
UBR4-206ENST00000419533 PPP4R4Q6NUP7 873 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 LRIG3Q6UXM1 1119 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 FAM71DQ8N9W8 422 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 ANKS1AQ92625 1134 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 TRIM51Q9BSJ1 452 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 KBTBD4Q9NVX7 518 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 CHMP2BQ9UQN3 213 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 LOC102724159A0A0B4J2E5 919 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 PLA2G6O60733 806 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 SGPL1O95470 568 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 KRT4P19013 534 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 GRIN1Q05586 938 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 STARD3Q14849 445 aa8.76□□□□□ -1.01
UBR4-206ENST00000419533 PWP2Q15269 919 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms