RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 A0A087X0T9 212 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 A0A0A6YYK5 440 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 BUB1BO60566 1050 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PPFIA2O75334 1257 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 NUDT17P0C025 328 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 FAM228BP0C875 321 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 MYOGP15173 224 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 SOX5P35711 763 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CLUL1Q15846 466 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 ASIC2Q16515 512 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CCDC142Q17RM4 750 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 SV2CQ496J9 727 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PIGWQ7Z7B1 504 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 SYCE1Q8N0S2 351 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 LRRC57Q8N9N7 239 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CCDC63Q8NA47 563 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 OR2W6PQ8NHA6 318 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PGM2Q96G03 612 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 ZNF317Q96PQ6 595 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 RAB17Q9H0T7 212 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CWH43Q9H720 699 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 TTC7AQ9ULT0 858 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PCDHB4Q9Y5E5 795 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 GOLGA6L10A0A0M3HER8 536 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CYB561D2O14569 222 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 CEP104O60308 925 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 GALTP07902 379 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 RFX1P22670 979 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 RPL9P32969 192 aaKnown RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PNPLA4P41247 253 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 E2F5Q15329 346 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 PPP1R7Q15435 360 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 HERC6Q8IVU3 1022 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 KBTBD7Q8WVZ9 684 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 SENP8Q96LD8 212 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 NSRP1Q9H0G5 558 aaKnown RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 MARCH5Q9NX47 278 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 INTUQ9ULD6 942 aa13.54□□□□□ -0.24
LINC00642-201ENST00000419459 UTP11Q9Y3A2 253 aaKnown RBP13.54□□□□□ -0.24
LINC00642-201ENST00000419459 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 TLL1O43897 1013 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 NEBLO76041 1014 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 CSPG5O95196 566 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 ALDH2P05091 517 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 ALADP13716 330 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 LMO2P25791 158 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 ALDH7A1P49419 539 aaKnown RBP13.53□□□□□ -0.24
LINC00642-201ENST00000419459 LMNB2Q03252 620 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 HIBCHQ6NVY1 386 aaPredicted RBP13.53□□□□□ -0.24
LINC00642-201ENST00000419459 IRF2BP2Q7Z5L9 587 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 SLFN11Q7Z7L1 901 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 FAM71AQ8IYT1 594 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 SLC20A1Q8WUM9 679 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 ANKRD27Q96NW4 1050 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 LPIN3Q9BQK8 851 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 TXLNGYQ9BZA5 131 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 GPR62Q9BZJ7 368 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 C15orf41Q9Y2V0 281 aa13.53□□□□□ -0.24
LINC00642-201ENST00000419459 KRIT1O00522 736 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 LIN7AO14910 233 aaPredicted RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 HUS1O60921 280 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 STAU1O95793 577 aaKnown RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 PDGFRBP09619 1106 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 P4HA1P13674 534 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 ACAT1P24752 427 aaKnown RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 STAT1P42224 750 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 MMP13P45452 471 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DNA2P51530 1060 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 NDST1P52848 882 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 PTK2Q05397 1052 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 NAA25Q14CX7 972 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 C11orf91Q3C1V1 193 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DPH6Q7L8W6 267 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DNAAF5Q86Y56 855 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 ADGRF2Q8IZF7 708 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 GBP7Q8N8V2 638 aaPredicted RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 C12orf29Q8N999 325 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 RBBP8NLQ8NC74 664 aaPredicted RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DDX27Q96GQ7 796 aaKnown RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 STMN4Q9H169 189 aaPredicted RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 NEUROG2Q9H2A3 272 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 DPEP3Q9H4B8 488 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 ADAM28Q9UKQ2 775 aa13.52□□□□□ -0.24
LINC00642-201ENST00000419459 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.24
LINC00642-201ENST00000419459 TADA2AO75478 443 aa13.52□□□□□ -0.25
LINC00642-201ENST00000419459 ARHGEF15O94989 841 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms