RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 UQCRFS1P1P0C7P4 283 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 TIMM10P62072 90 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 RABEP1Q15276 862 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 SF3B3Q15393 1217 aaKnown RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 ABCB5Q2M3G0 1257 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 ADGRG3Q86Y34 549 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 LPIN2Q92539 896 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 PTCD3Q96EY7 689 aaKnown RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 TMX3Q96JJ7 454 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 PUS7LQ9H0K6 701 aaKnown RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 C11orf54Q9H0W9 315 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 TMX1Q9H3N1 280 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 SYNPO2LQ9H987 977 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 KIAA1586Q9HCI6 787 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZNF277Q9NRM2 450 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 TDP1Q9NUW8 608 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 STK32BQ9NY57 414 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 KCNE5Q9UJ90 142 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 RIPOR2Q9Y4F9 1068 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 PCDHA13Q9Y5I0 950 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 NAV1Q8NEY1 1877 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 CCDC171Q6TFL3 1326 aa4.45□□□□□ -1.7
HMGB3P20-201ENST00000417997 MED23Q9ULK4 1368 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 A0A0D9SFI3 127 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 NDUFS2O75306 463 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 SERPINB2P05120 415 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZFYP08048 801 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 MYBL2P10244 700 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 GYS1P13807 737 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ADORA1P30542 326 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 SLC16A1P53985 500 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ANAPC15P60006 121 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 NOMO3P69849 1222 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 CHRNDQ07001 517 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ITKQ08881 620 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 TTF1Q15361 905 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 NOMO2Q5JPE7 1267 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 SLC10A5Q5PT55 438 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 RNF187Q5TA31 235 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZSCAN25Q6NSZ9 544 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 FAM43AQ8N2R8 423 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 VGLL2Q8N8G2 317 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 KBTBD3Q8NAB2 608 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 MTMR8Q96EF0 704 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 EDC3Q96F86 508 aaKnown RBP4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 PNKPQ96T60 521 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 AIFM2Q9BRQ8 373 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ANKRD2Q9GZV1 360 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ATP8A1Q9Y2Q0 1164 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 INSL6Q9Y581 213 aa4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 ARHGEF17Q96PE2 2063 aaPredicted RBP4.44□□□□□ -1.7
HMGB3P20-201ENST00000417997 LTBP1Q14766 1721 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 KLHL33A6NCF5 533 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 K7ESF4 209 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 FRAT2O75474 233 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 TAF5LO75529 589 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 ZKSCAN1P17029 563 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 MPLP40238 635 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 PHKA1P46020 1223 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 PTH2RP49190 550 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 CLK3P49761 638 aaKnown RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 GRAPQ13588 217 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 UBE4AQ14139 1066 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 GEN1Q17RS7 908 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 CAVIN4Q5BKX8 364 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 PRR5LQ6MZQ0 368 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 Q6ZNX1 250 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 RD3Q7Z3Z2 195 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 COLGALT2Q8IYK4 626 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 C1orf162Q8NEQ5 155 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 GRAPLQ8TC17 118 aaPredicted RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 NUP133Q8WUM0 1156 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 JADE3Q92613 823 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 CELF1Q92879 486 aaKnown RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 HDAC10Q969S8 669 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 SNX21Q969T3 373 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 NACC2Q96BF6 587 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 RBM17Q96I25 401 aaKnown RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 BOD1Q96IK1 185 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 FAM227BQ96M60 508 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 HELLSQ9NRZ9 838 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 GNL3LQ9NVN8 582 aaKnown RBP4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 LRIT1Q9P2V4 623 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 TUBD1Q9UJT1 453 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 TLK1Q9UKI8 766 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 DMTF1Q9Y222 760 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 CDYLQ9Y232 598 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 TIAM2Q8IVF5 1701 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 MAST3O60307 1309 aa4.43□□□□□ -1.7
HMGB3P20-201ENST00000417997 TRGV11A0A075B6L2 103 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 TRIM75PA6NK02 468 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 MASP2O00187 686 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 POLRMTO00411 1230 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 GRM6O15303 877 aa4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 RNF113AO15541 343 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 IDH1O75874 414 aaKnown RBP4.42□□□□□ -1.7
HMGB3P20-201ENST00000417997 HAUS5O94927 633 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms