RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 SAPCD2Q86UD0 394 aa12.46□□□□□ -0.42
UBR4-205ENST00000417040 CACNA2D2Q9NY47 1150 aa12.46□□□□□ -0.42
UBR4-205ENST00000417040 TBX20Q9UMR3 447 aa12.46□□□□□ -0.42
UBR4-205ENST00000417040 SLC30A1Q9Y6M5 507 aa12.46□□□□□ -0.42
UBR4-205ENST00000417040 PLA2R1Q13018 1463 aa12.46□□□□□ -0.42
UBR4-205ENST00000417040 PDZK1P1A8MUH7 402 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 GUCA1CO95843 209 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 CYP11B2P19099 503 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 SERPINB8P50452 374 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 STX5Q13190 355 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 CYP51A1Q16850 503 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 ANKS3Q6ZW76 656 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.45□□□□□ -0.42
UBR4-205ENST00000417040 TMC3Q7Z5M5 1100 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 TNIP2Q8NFZ5 429 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 SEPT5Q99719 369 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 FOXP3Q9BZS1 431 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 DGAT1O75907 488 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 NNMTP40261 264 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 ERVK-9P63128 1117 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 AGKQ53H12 422 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 OXNAD1Q96HP4 312 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 MARK4Q96L34 752 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 TARS2Q9BW92 718 aaKnown RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 RIC8BQ9NVN3 520 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 C6orf203Q9P0P8 240 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 PNMA3Q9UL41 463 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 DDX39BQ13838 428 aaKnown RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 NRF1Q16656 503 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 FAM83EQ2M2I3 478 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 GLRA4Q5JXX5 417 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 HDDC2Q7Z4H3 204 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 TRIM69Q86WT6 500 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 OR6J1Q8NGC5 347 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 AGAP11Q8TF27 550 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 AENQ8WTP8 325 aaKnown RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 COPS7BQ9H9Q2 264 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 HPSEQ9Y251 543 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 M0QYT0 321 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 PIK3CDO00329 1044 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 BAIAP3O94812 1187 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 SPOCD1Q6ZMY3 1216 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 EMC1Q8N766 993 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 L3MBTL3Q96JM7 780 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 MTMR12Q9C0I1 747 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 SPASTQ9UBP0 616 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 ADGRA3Q8IWK6 1321 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 EVPLLA8MZ36 301 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 MSH4O15457 936 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 ZNF189O75820 626 aaPredicted RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 CSHL1Q14406 222 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 CES3Q6UWW8 571 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 RBM43Q6ZSC3 357 aaKnown RBP12.45□□□□□ -0.42
UBR4-205ENST00000417040 LRRC8DQ7L1W4 858 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 FGD2Q7Z6J4 655 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 SLC5A5Q92911 643 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 CBWD1Q9BRT8 395 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 C2CD2Q9Y426 696 aa12.45□□□□□ -0.42
UBR4-205ENST00000417040 FAM20BO75063 409 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 PRLRP16471 622 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RRM1P23921 792 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SOX10P56693 466 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 CCDC149Q6ZUS6 474 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 C16orf86Q6ZW13 317 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 TLK2Q86UE8 772 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RDM1Q8NG50 284 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 CALML6Q8TD86 181 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 ZNF333Q96JL9 665 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 ETAA1Q9NY74 926 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 NARFQ9UHQ1 456 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SOX13Q9UN79 622 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 FCHO1O14526 889 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 KCNQ2O43526 872 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RPA1P27694 616 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RPA3P35244 121 aaPredicted RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 PPIDQ08752 370 aaKnown RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 DGKDQ16760 1214 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 RSBN1Q5VWQ0 802 aaPredicted RBP12.44□□□□□ -0.42
UBR4-205ENST00000417040 FIG4Q92562 907 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 HPDLQ96IR7 371 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 TRAPPC9Q96Q05 1148 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 MXRA8Q9BRK3 442 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 WWOXQ9NZC7 414 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 PACSIN3Q9UKS6 424 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 PRAMEF18Q5VWM3 479 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 EFCAB12Q6NXP0 572 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SYTL2Q9HCH5 934 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SYBUQ9NX95 663 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 SELENONQ9NZV5 590 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 TSPOAP1O95153 1857 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 LGR5O75473 907 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 WASHC2DQ5SRD0 308 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 CDC42EP5Q6NZY7 148 aa12.44□□□□□ -0.42
UBR4-205ENST00000417040 APLFQ8IW19 511 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms