RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NRG2O14511 850 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 LRRN2O75325 713 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 SP9P0CG40 484 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 UCHL3P15374 230 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 ATF6P18850 670 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 SLC9A1P19634 815 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 WEE1P30291 646 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 GCLMP48507 274 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 RPL10AP62906 217 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 FCHO2Q0JRZ9 810 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 ZNF528Q3MIS6 628 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 DPY19L2P1Q6NXN4 242 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 ADGRF2Q8IZF7 708 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 FBXL13Q8NEE6 735 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 BAP1Q92560 729 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 FAM81BQ96LP2 452 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 IER2Q9BTL4 223 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 INTS2Q9H0H0 1204 aaKnown RBP17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 TASP1Q9H6P5 420 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 L1RE1Q9UN81 338 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 MTF2Q9Y483 593 aaPredicted RBP17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 CACNA1HO95180 2353 aa17.98■□□□□ 0.47
SCAMP4-204ENST00000414057 ANK1P16157 1881 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 SOBPA7XYQ1 873 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 EPHB6O15197 1021 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 LMNAP02545 664 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 CSH1P0DML2 217 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 CSH2P0DML3 217 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 DLATP10515 647 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 DDX6P26196 483 aaKnown RBP eCLIP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 POLR2FP61218 127 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 ARHGAP29Q52LW3 1261 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 INTS6LQ5JSJ4 861 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 CXorf38Q8TB03 319 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 GIPC2Q8TF65 315 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 FAM3CQ92520 227 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 HPDLQ96IR7 371 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 C8orf33Q9H7E9 229 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 SIX2Q9NPC8 291 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 THG1LQ9NWX6 298 aaKnown RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 UXTQ9UBK9 157 aaPredicted RBP17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 APEX2Q9UBZ4 518 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
SCAMP4-204ENST00000414057 TNNI1P19237 187 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 PPP2R5DQ14738 602 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 STXBP5Q5T5C0 1151 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 SMYD5Q6GMV2 418 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 RRAGAQ7L523 313 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 SPATA2LQ8IUW3 424 aaPredicted RBP17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 LMO3Q8TAP4 145 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 FUBP3Q96I24 572 aaKnown RBP eCLIP17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 SPAG5Q96R06 1193 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 PI4K2AQ9BTU6 479 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 SIX4Q9UIU6 781 aa17.96■□□□□ 0.47
SCAMP4-204ENST00000414057 SCN1AP35498 2009 aa17.96■□□□□ 0.46
SCAMP4-204ENST00000414057 TSC2P49815 1807 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 LRRC53A6NM62 1247 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 GABRDO14764 452 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 KPNA1P52294 538 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 MAPRE1Q15691 268 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 ZACNQ401N2 412 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 SFMBT2Q5VUG0 894 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 LMBRD2Q68DH5 695 aaPredicted RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 SV2AQ7L0J3 742 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 CCDC170Q8IYT3 715 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 CELF5Q8N6W0 485 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 OR5B17Q8NGF7 314 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 AIPL1Q9NZN9 384 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 GTF3C4Q9UKN8 822 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 NDRG2Q9UN36 371 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 ZSCAN12O43309 604 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 AVPR1AP37288 418 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 CYP4F8P98187 520 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 SOWAHAQ2M3V2 549 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 CFAP221Q4G0U5 840 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 WDR59Q6PJI9 974 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 TRAPPC11Q7Z392 1133 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 BPIFB1Q8TDL5 484 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 MRPS31Q92665 395 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 MMS19Q96T76 1030 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 STK33Q9BYT3 514 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 IL21Q9HBE4 155 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 NLRC4Q9NPP4 1024 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 TMLHEQ9NVH6 421 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 RAB20Q9NX57 234 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 CDH9Q9ULB4 789 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 BZW2Q9Y6E2 419 aaKnown RBP17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 R4GN57 208 aa17.95■□□□□ 0.46
SCAMP4-204ENST00000414057 USP34Q70CQ2 3546 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 ARNTLO00327 626 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 C4BPAP04003 597 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 FAM163BP0C2L3 166 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 CCDC172P0C7W6 258 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 ACAT1P24752 427 aaKnown RBP17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 CDR1P51861 262 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 JAM2P57087 298 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 CMTM8Q8IZV2 173 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 ATRIPQ8WXE1 791 aa17.94■□□□□ 0.46
SCAMP4-204ENST00000414057 KIF9Q9HAQ2 790 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms