RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 HESX1Q9UBX0 185 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 MAGED2Q9UNF1 606 aaPredicted RBP6.77□□□□□ -1.33
USP54-202ENST00000413442 CNTN6Q9UQ52 1028 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 SCML2Q9UQR0 700 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 ZNF510Q9Y2H8 683 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 USP3Q9Y6I4 520 aa6.77□□□□□ -1.33
USP54-202ENST00000413442 A0A0A0MRY4 1105 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CCDC163A0A0D9SF12 145 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 FAM86C2PA6NEL3 165 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 ARNTLO00327 626 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 TRDMT1O14717 391 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 MED7O43513 233 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 NARSO43776 548 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 AP1G2O75843 785 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CLSTN1O94985 981 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 LETM1O95202 739 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 PAPSS2O95340 614 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 NFATC1O95644 943 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 OAS1P00973 400 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 CKMP06732 381 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 TPM2P07951 284 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 RALAP11233 206 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 DRD1P21728 446 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 BMP6P22004 513 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 EEF1GP26641 437 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 ATP5C1P36542 298 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 VIPR2P41587 438 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 PLA2G4AP47712 749 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 KPNA1P52294 538 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 BPIFB4P59827 614 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 ZNF445P59923 1031 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 PSMC1P62191 440 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 COG7P83436 770 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 TAF10Q12962 218 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 MTA1Q13330 715 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CUL2Q13617 745 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CNGA2Q16280 664 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 HSF5Q4G112 596 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 SGO2Q562F6 1265 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 DCAF17Q5H9S7 520 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 PM20D1Q6GTS8 502 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 GBP6Q6ZN66 633 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 PAQR9Q6ZVX9 377 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CCDC186Q7Z3E2 898 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 ACOT1Q86TX2 421 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 FAM35AQ86V20 835 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 FMNL3Q8IVF7 1028 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 SMYD4Q8IYR2 804 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 ADGRG2Q8IZP9 1017 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 SPEM1Q8N4L4 309 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CPA6Q8N4T0 437 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 TTC9BQ8N6N2 239 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 OSCP1Q8WVF1 389 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 KCTD13Q8WZ19 329 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 USP13Q92995 863 aaPredicted RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 FBXO32Q969P5 355 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 PLA2G2FQ9BZM2 168 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 DCLK3Q9C098 648 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 SMYD3Q9H7B4 428 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 OLA1Q9NTK5 396 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 LMBRD1Q9NUN5 540 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 DLGAP2Q9P1A6 1054 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 CA14Q9ULX7 337 aa6.76□□□□□ -1.33
USP54-202ENST00000413442 HELZP42694 1942 aaKnown RBP6.76□□□□□ -1.33
USP54-202ENST00000413442 ZNF318Q5VUA4 2279 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 SART1O43290 800 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 LAMTOR5O43504 91 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 FOXD2O60548 495 aaPredicted RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 SOAT2O75908 522 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CAVIN2O95810 425 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 TRIM49P0CI25 452 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 TRIM49CP0CI26 452 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 SETSIPP0DME0 302 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CD44P16070 742 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 GJA1P17302 382 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CHKAP35790 457 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 NBL1P41271 181 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 ACADSBP45954 432 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 IFNAR2P48551 515 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CCR3P51677 355 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 KIF11P52732 1056 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 PMS1P54277 932 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 BCAT1P54687 386 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 RAD23BP54727 409 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 GRSF1Q12849 480 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP54-202ENST00000413442 MTF1Q14872 753 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 RAB41Q5JT25 222 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 CWF19L1Q69YN2 538 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 TXNDC8Q6A555 127 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 KLHL10Q6JEL2 608 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 SASS6Q6UVJ0 657 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 LCLAT1Q6UWP7 414 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 RBM43Q6ZSC3 357 aaKnown RBP6.75□□□□□ -1.33
USP54-202ENST00000413442 CLEC20AQ6ZU45 233 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 TPRG1Q6ZUI0 275 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 HTR3DQ70Z44 454 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 BEND5Q7L4P6 421 aa6.75□□□□□ -1.33
USP54-202ENST00000413442 GPR161Q8N6U8 529 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms