RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 NKX3-2P78367 333 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 SLC6A3Q01959 620 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 CBLBQ13191 982 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 RASA2Q15283 850 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 FSCN1Q16658 493 aaKnown RBP14.22□□□□□ -0.13
LIMS1-205ENST00000410093 GOLGA7BQ2TAP0 167 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 P3H1Q32P28 736 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 KAZNQ674X7 775 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 ANKS1BQ7Z6G8 1248 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 TOP6BLQ8N6T0 577 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 C7orf31Q8N865 590 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 SLC35F5Q8WV83 523 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 DNAJB3Q8WWF6 145 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 HSFY1Q96LI6 401 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 HTATIP2Q9BUP3 242 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 FRMD8Q9BZ67 464 aaPredicted RBP14.22□□□□□ -0.13
LIMS1-205ENST00000410093 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS1-205ENST00000410093 CHST12Q9NRB3 414 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 SLC38A7Q9NVC3 462 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 FETUBQ9UGM5 382 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 HMGXB4Q9UGU5 601 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 LGALS13Q9UHV8 139 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 PIN4Q9Y237 131 aaKnown RBP14.22□□□□□ -0.13
LIMS1-205ENST00000410093 PDE4DIPQ5VU43 2346 aa14.22□□□□□ -0.13
LIMS1-205ENST00000410093 MCF2LO15068 1137 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 TRAPPC3O43617 180 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 CDH16O75309 829 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 SHBGP04278 402 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 MYL3P08590 195 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 PDGFRAP16234 1089 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 FGFR4P22455 802 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 LRPAP1P30533 357 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 PTPN9P43378 593 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 TAF6P49848 677 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 PLCB3Q01970 1234 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 GUCY1A3Q02108 690 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 BST2Q10589 180 aaKnown RBP14.21□□□□□ -0.13
LIMS1-205ENST00000410093 ATP13A4Q4VNC1 1196 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 DAB2IPQ5VWQ8 1189 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 MFSD14CQ5VZR4 134 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 OR6B2Q6IFH4 312 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 CENPUQ71F23 418 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 RPAINQ86UA6 219 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 CNPY4Q8N129 248 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 ANKRD52Q8NB46 1076 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 TRIB2Q92519 343 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 DPF3Q92784 378 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 ZBTB9Q96C00 473 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 ZMAT2Q96NC0 199 aaKnown RBP14.21□□□□□ -0.13
LIMS1-205ENST00000410093 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 CCDC134Q9H6E4 229 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 SPC25Q9HBM1 224 aa14.21□□□□□ -0.13
LIMS1-205ENST00000410093 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 A0A087WUV0 522 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 SMIM28A0A1B0GU29 152 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 KPNA7A9QM74 516 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 MDM4O15151 490 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 CST8O60676 142 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ZFXP17010 805 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TGM2P21980 687 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 SDC4P31431 198 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PURAQ00577 322 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 AUHQ13825 339 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 OLFML1Q6UWY5 402 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PPP1R21Q6ZMI0 780 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 FAM183BPQ6ZVS7 135 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 YTHDF3Q7Z739 585 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 NLRP14Q86W24 1093 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TDRPQ86YL5 185 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PPIL6Q8IXY8 311 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ARFGAP1Q8N6T3 406 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 APPL2Q8NEU8 664 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 RXFP2Q8WXD0 754 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 RSAD2Q8WXG1 361 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 P3H4Q92791 437 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 RBM15Q96T37 977 aaKnown RBP eCLIP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 MTG1Q9BT17 334 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 EIF2AQ9BY44 585 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ZWILCHQ9H900 591 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PAK6Q9NQU5 681 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 FLRT1Q9NZU1 646 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 RSPH14Q9UHP6 348 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 GINS2Q9Y248 185 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TLDC2A0PJX2 215 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 A8MXQ7 604 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 E5RJQ4 531 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 SGK1O00141 431 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TNRC18O15417 2968 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 HUS1O60921 280 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PFKMP08237 780 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 TCF4P15884 667 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 WARSP23381 471 aaKnown RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 GNL1P36915 607 aaPredicted RBP14.2□□□□□ -0.14
LIMS1-205ENST00000410093 MAGEA4P43358 317 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 GJA9P57773 515 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 GPS1Q13098 491 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PRAMEF19Q5SWL8 479 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 ERMARDQ5T6L9 678 aa14.2□□□□□ -0.14
LIMS1-205ENST00000410093 PPP1R26Q5T8A7 1209 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms