RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SH2D3CQ8N5H7 860 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 TTC8Q8TAM2 541 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 HASPINQ8TF76 798 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 TNPO1Q92973 898 aaKnown RBP5.35□□□□□ -1.55
CLK1-203ENST00000409769 LRIG1Q96JA1 1093 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 SMOQ99835 787 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 L1RE1Q9UN81 338 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 CDYLQ9Y232 598 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 MED16Q9Y2X0 877 aa5.35□□□□□ -1.55
CLK1-203ENST00000409769 ARHGEF17Q96PE2 2063 aaPredicted RBP5.35□□□□□ -1.55
CLK1-203ENST00000409769 ANKRD26Q9UPS8 1709 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 COL3A1P02461 1466 aaPredicted RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 CPSF1Q10570 1443 aaKnown RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 ANKRD36BQ8N2N9 1353 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 PROB1E7EW31 1015 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 GCOM1H8Y6P7 765 aaPredicted RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 FRS3O43559 492 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 AHSGP02765 367 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 GNAI2P04899 355 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 THP07101 528 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 ABCG1P45844 678 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 ZNF135P52742 658 aaPredicted RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 ARFIP2P53365 341 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 FPGSQ05932 587 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 TAPT1Q6NXT6 567 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 NPNTQ6UXI9 565 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 C1QL2Q7Z5L3 287 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 USP37Q86T82 979 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 SCARB1Q8WTV0 552 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 KBTBD7Q8WVZ9 684 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 TSR2Q969E8 191 aaKnown RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 FBXL20Q96IG2 436 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 TRIB1Q96RU8 372 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 SLC29A3Q9BZD2 475 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 DPH1Q9BZG8 443 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 TINAGL1Q9GZM7 467 aaPredicted RBP5.34□□□□□ -1.55
CLK1-203ENST00000409769 KIF20BQ96Q89 1820 aa5.34□□□□□ -1.55
CLK1-203ENST00000409769 PPIP5K1Q6PFW1 1433 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 A0A1W2PP64 1363 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 NPC1L1Q9UHC9 1359 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 CGB1A6NKQ9 187 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 KRTAP29-1A8MX34 341 aaPredicted RBP5.33□□□□□ -1.56
CLK1-203ENST00000409769 MAPK10P53779 464 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 SOX8P57073 446 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 PSMC1P62191 440 aaKnown RBP5.33□□□□□ -1.56
CLK1-203ENST00000409769 KHDC1LQ5JSQ8 128 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 FAM160B1Q5W0V3 765 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.33□□□□□ -1.56
CLK1-203ENST00000409769 MAEAQ7L5Y9 396 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 FMNL3Q8IVF7 1028 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 B3GNT5Q9BYG0 378 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 FAM204AQ9H8W3 233 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 PANK3Q9H999 370 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 CPNE5Q9HCH3 593 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 PRDM11Q9NQV5 511 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 CNNM1Q9NRU3 951 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 PIH1D1Q9NWS0 290 aaKnown RBP5.33□□□□□ -1.56
CLK1-203ENST00000409769 OBP2AQ9NY56 170 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 AGAP1Q9UPQ3 857 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 PLEKHM1Q9Y4G2 1056 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 WNT6Q9Y6F9 365 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 KIF1AQ12756 1690 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 USP54Q70EL1 1684 aa5.33□□□□□ -1.56
CLK1-203ENST00000409769 MST1RQ04912 1400 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 SSH2Q76I76 1423 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 POLR3AO14802 1390 aaPredicted RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 MARF1Q9Y4F3 1742 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 CAPN8A6NHC0 703 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 POLRMTO00411 1230 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 PHGDHO43175 533 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 DNAJB5O75953 348 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 PARNO95453 639 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 ZBED1O96006 694 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 PIM1P11309 404 aaPredicted RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 HDCP19113 662 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 PROK1P58294 105 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 EXOSC9Q06265 439 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 ARHGAP29Q52LW3 1261 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 PEG10Q86TG7 708 aaKnown RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 ADGRG5Q8IZF4 528 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 TMEM125Q96AQ2 219 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 C8orf48Q96LL4 319 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 OSBPL9Q96SU4 736 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 POLR3GLQ9BT43 218 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 TRIM54Q9BYV2 358 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 ATP6V0A4Q9HBG4 840 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 SLAMF7Q9NQ25 335 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 IL17RBQ9NRM6 502 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 RNF7Q9UBF6 113 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 RGS17Q9UGC6 210 aaPredicted RBP5.32□□□□□ -1.56
CLK1-203ENST00000409769 PCDHA6Q9UN73 950 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 PAXBP1Q9Y5B6 917 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 C1orf167Q5SNV9 1468 aa5.32□□□□□ -1.56
CLK1-203ENST00000409769 NSD3Q9BZ95 1437 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 TRPM3Q9HCF6 1732 aaPredicted RBP5.31□□□□□ -1.56
CLK1-203ENST00000409769 PARD3Q8TEW0 1356 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 VSTM5A8MXK1 200 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 MYO1FO00160 1098 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 PRKCGP05129 697 aa5.31□□□□□ -1.56
CLK1-203ENST00000409769 TOB1P50616 345 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms