RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 ENOX1Q8TC92 643 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 WFIKKN2Q8TEU8 576 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 RAB3IPQ96QF0 476 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 ATP13A1Q9HD20 1204 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 RIPK3Q9Y572 518 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3DA0A087WVF3 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3IA0A087WXS9 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3EA0A087X179 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3KA0A087X1G2 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3FA6NER0 549 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 C2orf81A6NN90 581 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3LB9A6J9 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 KRIT1O00522 736 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 SLC37A4O43826 429 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CA3P07451 260 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3HP0C7X1 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CYBAP13498 195 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 BDNFP23560 247 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 ZNF135P52742 658 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 E2F4Q16254 413 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 MPPE1Q53F39 396 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3GQ6DHY5 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3CQ6IPX1 549 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 SH3BP5LQ7L8J4 393 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 RPAINQ86UA6 219 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 IFT20Q8IY31 132 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TBC1D3Q8IZP1 549 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CELF5Q8N6W0 485 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 LENG9Q96B70 501 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TMEM176AQ96HP8 235 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 ARHGEF4Q9NR80 690 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 USP20Q9Y2K6 914 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 STARD13Q9Y3M8 1113 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GOLGA8QA0A0J9YX86 632 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 UBA6A0AVT1 1052 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GOLGA8OA6NCC3 632 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 MIF4GDA9UHW6 222 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GOLGA8NF8WBI6 632 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 H0YGN5 161 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TSPAN3O60637 253 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 BLKP51451 505 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 NNTQ13423 1086 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 PIGHQ14442 188 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GRM3Q14832 879 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 P3H1Q32P28 736 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TMTC4Q5T4D3 741 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TOP6BLQ8N6T0 577 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 SETD7Q8WTS6 366 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 PRCCQ92733 491 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 IL12RB2Q99665 862 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GIMAP4Q9NUV9 329 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CPSF2Q9P2I0 782 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 VPS51Q9UID3 782 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 NDUFS3O75489 264 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 PNMA6AP0CW24 399 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TAL1P17542 331 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CYP3A5P20815 502 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CDC25BP30305 580 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 ZC2HC1CQ53FD0 456 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 COLEC12Q5KU26 742 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 FBXW10Q5XX13 1052 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 JADE1Q6IE81 842 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 PTCRAQ6ISU1 281 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GDF6Q6KF10 455 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 GPAT2Q6NUI2 795 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 LGI2Q8N0V4 545 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 TTC8Q8TAM2 541 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 PPP1R13LQ8WUF5 828 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 RTP3Q9BQQ7 232 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 CFAP97Q9P2B7 532 aa7.8□□□□□ -1.16
SH3D19-203ENST00000409598 AFF4Q9UHB7 1163 aaKnown RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 HEMK1Q9Y5R4 338 aaPredicted RBP7.8□□□□□ -1.16
SH3D19-203ENST00000409598 C4BP0C0L5 1744 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 GLI3P10071 1580 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ZSCAN5CA6NGD5 496 aaPredicted RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 PRPF4O43172 522 aaKnown RBP eCLIP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 IL1BP01584 269 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 INHBAP08476 426 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 TYMPP19971 482 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ITGALP20701 1170 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 SERPINA4P29622 427 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 FMO5P49326 533 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ACOX1Q15067 660 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 SEZ6Q53EL9 994 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ALKBH5Q6P6C2 394 aaKnown RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 SMYD4Q8IYR2 804 aaPredicted RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 LRRC52Q8N7C0 313 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ING5Q8WYH8 240 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 FAF2Q96CS3 445 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 RUSC1Q9BVN2 902 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 NIFKQ9BYG3 293 aaKnown RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 SENP1Q9P0U3 644 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ZFP37Q9Y6Q3 630 aaPredicted RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 CAPN7Q9Y6W3 813 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 COL3A1P02461 1466 aaPredicted RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 ZNF839A8K0R7 811 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 SERPIND1P05546 499 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 PTPN1P18031 435 aaKnown RBP7.79□□□□□ -1.16
SH3D19-203ENST00000409598 BOLA3Q53S33 107 aa7.79□□□□□ -1.16
SH3D19-203ENST00000409598 PTRHD1Q6GMV3 140 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms