RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 UBXN6Q9BZV1 441 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 FBXO44Q9H4M3 255 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 EPHX3Q9H6B9 360 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 CBX8Q9HC52 389 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 PLCB1Q9NQ66 1216 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 HESX1Q9UBX0 185 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 TSPAN16Q9UKR8 245 aa20.98■□□□□ 0.95
PDLIM2-207ENST00000409417 FAM92AA1XBS5 289 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 ZNF840PA6NDX5 716 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 RFX1P22670 979 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 BCAT1P54687 386 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 IFRD2Q12894 506 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 STILQ15468 1287 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 CNGA2Q16280 664 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 TTC30AQ86WT1 665 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 MAB21L3Q8N8X9 362 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 OVCA2Q8WZ82 227 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 FBXO32Q969P5 355 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 E2F7Q96AV8 911 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 ZSWIM1Q9BR11 485 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 LSM14BQ9BX40 385 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 GREB1Q4ZG55 1949 aa20.97■□□□□ 0.95
PDLIM2-207ENST00000409417 UCHL3P15374 230 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 VIPR2P41587 438 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 UBXN1Q04323 297 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 GPRIN1Q7Z2K8 1008 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 PDZD8Q8NEN9 1154 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 SMOC2Q9H3U7 446 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 AJAP1Q9UKB5 411 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 DUSP12Q9UNI6 340 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 NCANO14594 1321 aa20.96■□□□□ 0.95
PDLIM2-207ENST00000409417 PFKLP17858 780 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 BRD2P25440 801 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 AVPR1AP37288 418 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 USP8P40818 1118 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 BST2Q10589 180 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 PKDCCQ504Y2 493 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 LUZP1Q86V48 1076 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 NAA15Q9BXJ9 866 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 TRPC7Q9HCX4 862 aa20.95■□□□□ 0.94
PDLIM2-207ENST00000409417 C2orf78A6NCI8 922 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 FOXN3O00409 490 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 XPO1O14980 1071 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SRFP11831 508 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 PDE6CP51160 858 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 KIF11P52732 1056 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 PDE4CQ08493 712 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 PIGZQ86VD9 579 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 ERGIC2Q96RQ1 377 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 PLA2G2FQ9BZM2 168 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 OBP2AQ9NY56 170 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 CHORDC1Q9UHD1 332 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SCML2Q9UQR0 700 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SIK3Q9Y2K2 1263 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 FHOD1Q9Y613 1164 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 MYH10P35580 1976 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 TRAV19A0A0A6YYK7 116 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 NARSO43776 548 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 PRAMEF12O95522 483 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 CALCAP01258 141 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 ZDHHC11BP0C7U3 371 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SETSIPP0DME0 302 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 TPM4P67936 248 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SIGLEC14Q08ET2 396 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 RAPGEF1Q13905 1077 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 DRAP1Q14919 205 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SYCP1Q15431 976 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SNX30Q5VWJ9 437 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 TRIM67Q6ZTA4 783 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 MFSD6LQ8IWD5 586 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 FAM71AQ8IYT1 594 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 UBA3Q8TBC4 463 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 RSPRY1Q96DX4 576 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 CYP2S1Q96SQ9 504 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 SLC2A4RGQ9NR83 387 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 FAM207AQ9NSI2 230 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 GMIPQ9P107 970 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 DAAM1Q9Y4D1 1078 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 USP3Q9Y6I4 520 aa20.94■□□□□ 0.94
PDLIM2-207ENST00000409417 TECTAO75443 2155 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 HEPACAM2A8MVW5 462 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 DPYSL4O14531 572 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 CYP26A1O43174 497 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 MED7O43513 233 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 USP17L7P0C7H9 530 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 PSMC3P17980 439 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 HDCP19113 662 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 GNA15P30679 374 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 PLA2G4AP47712 749 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 KLK7P49862 253 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 ZNF268Q14587 947 aaPredicted RBP20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 MEA1Q16626 185 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 RAB41Q5JT25 222 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 VITQ6UXI7 678 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 GPIHBP1Q8IV16 184 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 CELF5Q8N6W0 485 aaKnown RBP20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 DEPDC1BQ8WUY9 529 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 ZNF606Q8WXB4 792 aa20.93■□□□□ 0.94
PDLIM2-207ENST00000409417 USP13Q92995 863 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms