RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 SLC1A5Q15758 541 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 SFT2D3Q587I9 215 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 DEPDC1Q5TB30 811 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 OGFRL1Q5TC84 451 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 RNF207Q6ZRF8 634 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 DYMQ7RTS9 669 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 ARPINQ7Z6K5 226 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 OXNAD1Q96HP4 312 aaPredicted RBP11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 OSBPL6Q9BZF3 934 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 KLC2Q9H0B6 622 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 SLC7A8Q9UHI5 535 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 STX8Q9UNK0 236 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 COG5Q9UP83 839 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 IGSF9BQ9UPX0 1349 aa11.1□□□□□ -0.63
NIF3L1-204ENST00000409357 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L15C9J2P7 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L13C9JLJ4 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L11C9JVI0 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L18D6R9N7 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L22D6RA61 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L17D6RBQ6 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L19D6RCP7 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L20D6RJB6 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 SPECC1L-ADORA2AF8WAN1 911 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 H0YJX3 145 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 FCHO1O14526 889 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 ADCY3O60266 1144 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 CCNT1O60563 726 aaKnown RBP11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 LRRN2O75325 713 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 C8BP07358 591 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 PYGMP11217 842 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 TSHRP16473 764 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 CDH2P19022 906 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 CA4P22748 312 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 NR2F2P24468 414 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MAGEA4P43358 317 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 PRMT2P55345 433 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 ZBTB16Q05516 673 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 USP17L24Q0WX57 530 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 PTP4A2Q12974 167 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 LRRC41Q15345 812 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 TMED2Q15363 201 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 NDUFA5Q16718 116 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MAP7D1Q3KQU3 841 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 TCERG1LQ5VWI1 586 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 GPIHBP1Q8IV16 184 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 SDR16C5Q8N3Y7 309 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 KCTD17Q8N5Z5 321 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 ICA1LQ8NDH6 482 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 RFWD2Q8NHY2 731 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 ARHGEF26Q96DR7 871 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 HAUS8Q9BT25 410 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MANSC1Q9H8J5 431 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 MKNK2Q9HBH9 465 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 GJD2Q9UKL4 321 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 PPM1HQ9ULR3 514 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 LZTS1Q9Y250 596 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 TMX2Q9Y320 296 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 CEPT1Q9Y6K0 416 aa11.09□□□□□ -0.63
NIF3L1-204ENST00000409357 EXOC1LA0A1B0GW35 172 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GOLGA8TH3BQL2 631 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GOLGA8HP0CJ92 632 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PAX3P23760 479 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 HOXD10P28358 340 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 STIP1P31948 543 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FDFT1P37268 417 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 SLC1A1P43005 524 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 FOLH1Q04609 750 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TRIM32Q13049 653 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PRKD1Q15139 912 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 MAPK6Q16659 721 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 MYLK3Q32MK0 819 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 EFHC2Q5JST6 749 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 EFHC1Q5JVL4 640 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PGM2L1Q6PCE3 622 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 LVRNQ6Q4G3 990 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 RAPH1Q70E73 1250 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 ADAT2Q7Z6V5 191 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GLYCTKQ8IVS8 523 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GPRC5AQ8NFJ5 357 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PSPC1Q8WXF1 523 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 KRT35Q92764 455 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 SLC35C1Q96A29 364 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 COA7Q96BR5 231 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 DNAJC1Q96KC8 554 aaKnown RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 CCDC17Q96LX7 622 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 HGH1Q9BTY7 390 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TSSK1BQ9BXA7 367 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 TMEM120AQ9BXJ8 343 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 THAP2Q9H0W7 228 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 GIN1Q9NXP7 522 aa11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 PSMC3IPQ9P2W1 217 aaPredicted RBP11.08□□□□□ -0.64
NIF3L1-204ENST00000409357 ASIC3Q9UHC3 531 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms