RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 HNRNPH2P55795 449 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 NOP14P78316 857 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 MCL1Q07820 350 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 IFFO1Q0D2I5 559 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 CALCOCO2Q13137 446 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 DSC3Q14574 896 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 CEP85LQ5SZL2 805 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 DCAF12L1Q5VU92 463 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 TWF2Q6IBS0 349 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 NOTUMQ6P988 496 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 CRELD2Q6UXH1 353 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 APBB1IPQ7Z5R6 666 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 RTN4RL1Q86UN2 441 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 RHOT1Q8IXI2 618 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 VN1R2Q8NFZ6 395 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 SUSD6Q92537 303 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 ALG3Q92685 438 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 SLCO2A1Q92959 643 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 FAM124BQ9H5Z6 455 aaPredicted RBP13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 LRRC19Q9H756 370 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 TMBIM4Q9HC24 238 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 RGS18Q9NS28 235 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 PARVAQ9NVD7 372 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 ADAM22Q9P0K1 906 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 ANKFY1Q9P2R3 1169 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 IP6K2Q9UHH9 426 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 CNTNAP2Q9UHC6 1331 aa13.6□□□□□ -0.23
SMARCB1-203ENST00000407082 ZSCAN5CA6NGD5 496 aaPredicted RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 MED7O43513 233 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 PROSCO94903 275 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 ECEL1O95672 775 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 GAS8O95995 478 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 EDN1P05305 212 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 POLR2BP30876 1174 aaKnown RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 ERVFC1P60507 584 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 DHX9Q08211 1270 aaKnown RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 ZNF211Q13398 564 aaPredicted RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 DUSP6Q16828 381 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 ATF7IP2Q5U623 682 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 SLC24A5Q71RS6 500 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 TMC3Q7Z5M5 1100 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 THNSL1Q8IYQ7 743 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 TTC39CQ8N584 583 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 RBBP8NLQ8NC74 664 aaPredicted RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 RIN2Q8WYP3 895 aaPredicted RBP13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 PI4K2AQ9BTU6 479 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 SMOC2Q9H3U7 446 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 AAASQ9NRG9 546 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 NR2E1Q9Y466 385 aa13.59□□□□□ -0.23
SMARCB1-203ENST00000407082 VNN1O95497 513 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ASS1P00966 412 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 TMEM191BP0C7N4 346 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PYGMP11217 842 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 P4HA1P13674 534 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ITIH2P19823 946 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 NR1D1P20393 614 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ACO1P21399 889 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ECHS1P30084 290 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 RDXP35241 583 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PTGIRP43119 386 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 IRAK1P51617 712 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 GNGT1P63211 74 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ODF2Q5BJF6 829 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PLPP4Q5VZY2 271 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ANKRD54Q6NXT1 300 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 SLC27A1Q6PCB7 646 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 TMEM270Q6UE05 265 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 MICALCLQ6ZW33 695 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 B4GALNT4Q76KP1 1039 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 CDR2LQ86X02 465 aaPredicted RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 UBALD2Q8IYN6 164 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PIK3R5Q8WYR1 880 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 RBM41Q96IZ5 413 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 NIF3L1Q9GZT8 377 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 S1PR5Q9H228 398 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 DPH5Q9H2P9 285 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PDZD7Q9H5P4 517 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 CNOT10Q9H9A5 744 aaKnown RBP13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 WHRNQ9P202 907 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 STRIP2Q9ULQ0 834 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 TNFSF13BQ9Y275 285 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 PCDHB7Q9Y5E2 793 aa13.58□□□□□ -0.24
SMARCB1-203ENST00000407082 GVINP1Q7Z2Y8 2422 aa13.57□□□□□ -0.24
SMARCB1-203ENST00000407082 A0A0U1RQF3 1178 aa13.57□□□□□ -0.24
SMARCB1-203ENST00000407082 MED19A0JLT2 244 aaPredicted RBP13.57□□□□□ -0.24
SMARCB1-203ENST00000407082 TBKBP1A7MCY6 615 aa13.57□□□□□ -0.24
SMARCB1-203ENST00000407082 C9IYK1 514 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms