RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 LLPHQ9BRT6 129 aaKnown RBP12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PARVGQ9HBI0 331 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SMPD4Q9NXE4 827 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CPQQ9Y646 472 aa12.75□□□□□ -0.37
SPTLC1P3-201ENST00000403408 IGHV1OR15-9A0A0B4J2B8 117 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 A0A1W2PQF6 199 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZNF840PA6NDX5 716 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 H0Y626 953 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 OPHN1O60890 802 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PPP1R37O75864 691 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRIM16O95361 564 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SERPINF2P08697 491 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FTH1P19P0C7X4 201 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PLCG1P19174 1290 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PSMC1P62191 440 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SLC7A9P82251 487 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GNL2Q13823 731 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KCNB1Q14721 858 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 DUOXA1Q1HG43 343 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SPDYCQ5MJ68 293 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HNRNPLLQ8WVV9 542 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ADAMTS14Q8WXS8 1223 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZFRQ96KR1 1074 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PNKPQ96T60 521 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 STRA6Q9BX79 667 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 DNAAF2Q9NVR5 837 aaKnown RBP12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LIMCH1Q9UPQ0 1083 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RAXQ9Y2V3 346 aa12.74□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PTPRJQ12913 1337 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HECTD1Q9ULT8 2610 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MYO18BQ8IUG5 2567 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CBFA2T3O75081 653 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FAM13AO94988 1023 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 OAS1P00973 400 aaKnown RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 BDNFP23560 247 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 WASP42768 502 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MAGEA11P43364 429 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RPL6Q02878 288 aaKnown RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZNF33AQ06730 810 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRIP6Q15654 476 aaKnown RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZNF423Q2M1K9 1284 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LY6G5CQ5SRR4 150 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ETFBKMTQ8IXQ9 262 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SAAL1Q96ER3 474 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FUBP3Q96I24 572 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SPACA7Q96KW9 195 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SPATA17Q96L03 361 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ACOX2Q99424 681 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TTLL2Q9BWV7 592 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SLC6A17Q9H1V8 727 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ST6GALNAC4Q9H4F1 302 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 POLMQ9NP87 494 aaPredicted RBP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ARHGEF4Q9NR80 690 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GDAP2Q9NXN4 497 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CALCOCO1Q9P1Z2 691 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 BCCIPQ9P287 314 aaKnown RBP eCLIP12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SNX9Q9Y5X1 595 aa12.73□□□□□ -0.37
SPTLC1P3-201ENST00000403408 MYMKA6NI61 221 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 APODP05090 189 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HOXD12P35452 270 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GRIA2P42262 883 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TNFRSF4P43489 277 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 POU5F1Q01860 360 aaKnown RBP12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GFPT1Q06210 699 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 RESTQ13127 1097 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 EOGTQ5NDL2 527 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 LMBRD2Q68DH5 695 aaPredicted RBP12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZNF720Q7Z2F6 126 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 BRSK2Q8IWQ3 736 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 PGBD3Q8N328 593 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HDDC3Q8N4P3 179 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 KCTD17Q8N5Z5 321 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NAT16Q8N8M0 369 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CCDC26Q8TAB7 109 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ADAM32Q8TC27 787 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 P2RY11Q96G91 374 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZNF560Q96MR9 790 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FAM213AQ9BRX8 229 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 FGFBP2Q9BYJ0 223 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ZHX3Q9H4I2 956 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 TOR4AQ9NXH8 423 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CFAP97Q9P2B7 532 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 SHROOM3Q8TF72 1996 aa12.72□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GOLGA8IPA6NC78 632 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 GOLGA8JA6NMD2 632 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 CYSRT1A8MQ03 144 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 HUS1O60921 280 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 IL18RAPO95256 599 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 ADH5P11766 374 aa12.71□□□□□ -0.37
SPTLC1P3-201ENST00000403408 NDUFV2P19404 249 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms