RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ANXA13P27216 316 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 TIE1P35590 1138 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 DHPSP49366 369 aaPredicted RBP12.72□□□□□ -0.37
LINC00544-201ENST00000400540 SLC7A9P82251 487 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 KDSRQ06136 332 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 DHCR24Q15392 516 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 CRY1Q16526 586 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 ARMCX6Q7L4S7 300 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 TXNDC5Q8NBS9 432 aaKnown RBP12.72□□□□□ -0.37
LINC00544-201ENST00000400540 MYCBPAPQ8TBZ2 947 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 USP28Q96RU2 1077 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 MMS19Q96T76 1030 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 TTLL2Q9BWV7 592 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 TMEM9BQ9NQ34 198 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 HSPBP1Q9NZL4 362 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 WASF3Q9UPY6 502 aa12.72□□□□□ -0.37
LINC00544-201ENST00000400540 R3HCC1Q9Y3T6 440 aaKnown RBP12.72□□□□□ -0.37
LINC00544-201ENST00000400540 DSPP15924 2871 aaKnown RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 ATXN2Q99700 1313 aaKnown RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 ZNF233A6NK53 670 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 CLDN5O00501 218 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 TRIM66O15016 1216 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 KLF8O95600 359 aaPredicted RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 OAS1P00973 400 aaKnown RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 PROS1P07225 676 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 PDE6CP51160 858 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 NOP14P78316 857 aaKnown RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 IRX4P78413 519 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 TAF10Q12962 218 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 CUL4AQ13619 759 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 MAPRE1Q15691 268 aaKnown RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 DUOXA2Q1HG44 320 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 EMC10Q5UCC4 262 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 UNQ6494/PRO21346Q6UXR6 183 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 HS2ST1Q7LGA3 356 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 TRAPPC11Q7Z392 1133 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 WDR49Q8IV35 697 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 ADGRG2Q8IZP9 1017 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 IL17RCQ8NAC3 791 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 OLIG1Q8TAK6 271 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 PIGKQ92643 395 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 FNBP1Q96RU3 617 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 ZNF518BQ9C0D4 1074 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 CFAP97Q9P2B7 532 aa12.71□□□□□ -0.37
LINC00544-201ENST00000400540 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
LINC00544-201ENST00000400540 ITPR1Q14643 2758 aa12.71□□□□□ -0.38
LINC00544-201ENST00000400540 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 ADAM23O75077 832 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 KAT7O95251 611 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 DLATP10515 647 aaKnown RBP12.7□□□□□ -0.38
LINC00544-201ENST00000400540 MBL2P11226 248 aaPredicted RBP12.7□□□□□ -0.38
LINC00544-201ENST00000400540 PFKLP17858 780 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 SYT1P21579 422 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 PTGER3P43115 390 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 MRPS21P82921 87 aaKnown RBP12.7□□□□□ -0.38
LINC00544-201ENST00000400540 UAP1L1Q3KQV9 507 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 DAB2IPQ5VWQ8 1189 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 RHBDF2Q6PJF5 856 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 C11orf74Q86VG3 221 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 CCDC65Q8IXS2 484 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 TMEFF1Q8IYR6 380 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 OR6B3Q8NGW1 331 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 CCDC26Q8TAB7 109 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 C8orf48Q96LL4 319 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 CEP295NLQ96MC4 621 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 PNKPQ96T60 521 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 TMEM121BQ9BXQ6 578 aaPredicted RBP12.7□□□□□ -0.38
LINC00544-201ENST00000400540 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 SNX25Q9H3E2 840 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 FSCN3Q9NQT6 498 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 TMEM74BQ9NUR3 256 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 MBD1Q9UIS9 605 aaPredicted RBP12.7□□□□□ -0.38
LINC00544-201ENST00000400540 ZMIZ1Q9ULJ6 1067 aa12.7□□□□□ -0.38
LINC00544-201ENST00000400540 FAM208BQ5VWN6 2430 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 KIAA0391O15091 583 aaKnown RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 CLIC2O15247 247 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 TGFB1I1O43294 461 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 APODP05090 189 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 ADH5P11766 374 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 GNL1P36915 607 aaPredicted RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 P2RY2P41231 377 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 KIR2DL1P43626 348 aaPredicted RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 SLC39A14Q15043 492 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 SURF1Q15526 300 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 SNRNP35Q16560 246 aaKnown RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 TRIM61Q5EBN2 209 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 TDRD10Q5VZ19 366 aaKnown RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 PHTF2Q8N3S3 785 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 DEFB124Q8NES8 71 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 HMGB4Q8WW32 186 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 ELMO3Q96BJ8 720 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 CCDC127Q96BQ5 260 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 ZFRQ96KR1 1074 aaKnown RBP12.69□□□□□ -0.38
LINC00544-201ENST00000400540 CGRRF1Q99675 332 aa12.69□□□□□ -0.38
LINC00544-201ENST00000400540 GZF1Q9H116 711 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms