RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 DNAJC24Q6P3W2 148 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 DRICH1Q6PGQ1 229 aaPredicted RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 OR5B17Q8NGF7 314 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 WDR60Q8WVS4 1066 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 ZNF606Q8WXB4 792 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 PTCD3Q96EY7 689 aaKnown RBP16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 MPP4Q96JB8 637 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 RABGEF1Q9UJ41 708 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 SHOC2Q9UQ13 582 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 NFASCO94856 1347 aa16.69■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 A6NJR5 290 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 DGAT1O75907 488 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 MMP8P22894 467 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 PRKCEQ02156 737 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 ZNF394Q53GI3 561 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 EFHC2Q5JST6 749 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 FNBP1LQ5T0N5 605 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 ZBTB8BQ8NAP8 495 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 MCPH1Q8NEM0 835 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 PYROXD1Q8WU10 500 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 ATP6V0A1Q93050 837 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 TMEM143Q96AN5 459 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 NSL1Q96IY1 281 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 LBHD1Q9BQE6 289 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 WDR37Q9Y2I8 494 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 WASF2Q9Y6W5 498 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 hCG_2014768A0A024R1R8 64 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 A0A0G2JND7 137 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 A0A0J9YVX5 310 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 CRABP2P29373 138 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 GDF10P55107 478 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 MPP3Q13368 585 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 ITGA9Q13797 1035 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 TNFAIP1Q13829 316 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 TFDP3Q5H9I0 405 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 RHPN2Q8IUC4 686 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 CCDC60Q8IWA6 550 aaPredicted RBP16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 TCP10LQ8TDR4 215 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 PCDH9Q9HC56 1237 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 CYP26B1Q9NR63 512 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 SLC17A7Q9P2U7 560 aa16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 DRG1Q9Y295 367 aaKnown RBP16.68■□□□□ 0.26
CHMP1A-201ENST00000397901 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 HAUS5O94927 633 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 RPS12P25398 132 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 SERPINB3P29508 390 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 CBX3Q13185 183 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 THOC5Q13769 683 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 BAATQ14032 418 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 TTLL12Q14166 644 aaPredicted RBP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 SMTNL2Q2TAL5 461 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 CYP4A22Q5TCH4 519 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 ARHGAP24Q8N264 748 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 PDCD7Q8N8D1 485 aaKnown RBP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 CLMNQ96JQ2 1002 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 PAFAH2Q99487 392 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 EPB41L1Q9H4G0 881 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 PDLIM7Q9NR12 457 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 PTTG2Q9NZH5 202 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 KANSL3Q9P2N6 904 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 ZBED4O75132 1171 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 ZBTB7AO95365 584 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 TROVE2P10155 538 aaKnown RBP eCLIP16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 CDKN2BP42772 138 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 C3orf62Q6ZUJ4 267 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 ACAD11Q709F0 780 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 GINM1Q9NU53 330 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 ARL8BQ9NVJ2 186 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 AGTPBP1Q9UPW5 1226 aa16.67■□□□□ 0.26
CHMP1A-201ENST00000397901 CFAP69A5D8W1 941 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 LRRIQ4A6NIV6 560 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 ITGAVP06756 1048 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 RGS2P41220 211 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 ENPEPQ07075 957 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 NCOA4Q13772 614 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 CFAP157Q5JU67 520 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 ZNF554Q86TJ5 538 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 ATP11CQ8NB49 1132 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 NKD2Q969F2 451 aaPredicted RBP16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 WNK4Q96J92 1243 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 WDR83Q9BRX9 315 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 MSTO1Q9BUK6 570 aa16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 TARS2Q9BW92 718 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 PAIP2BQ9ULR5 123 aaKnown RBP16.66■□□□□ 0.26
CHMP1A-201ENST00000397901 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 F8W8V4 182 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 OPHN1O60890 802 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 RNASEH1O60930 286 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 PIM1P11309 404 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 ANPEPP15144 967 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 TBXAS1P24557 533 aaPredicted RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 OTUD4Q01804 1114 aaKnown RBP16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 BBS9Q3SYG4 887 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 KCNT1Q5JUK3 1230 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 OLFML2BQ68BL8 750 aa16.65■□□□□ 0.26
CHMP1A-201ENST00000397901 FBXO36Q8NEA4 188 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms