RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 MSS51Q4VC12 460 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 XYLT1Q86Y38 959 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADAM32Q8TC27 787 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 LRRC37BQ96QE4 947 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 MRPL45Q9BRJ2 306 aaKnown RBP10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 XYLT2Q9H1B5 865 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 HAO1Q9UJM8 370 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 GREB1LQ9C091 1923 aaPredicted RBP10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 ADGRA2Q96PE1 1338 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 CFAP69A5D8W1 941 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 KBTBD13C9JR72 458 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 CYP2C9P11712 490 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 FOXN2P32314 431 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 CRADDP78560 199 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 TFDP2Q14188 446 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 MORF4L2Q15014 288 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 TSHZ1Q6ZSZ6 1077 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 SGSM3Q96HU1 749 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 RILPQ96NA2 401 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 ZNF518BQ9C0D4 1074 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 CXCL16Q9H2A7 254 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 PCDH9Q9HC56 1237 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 TXNDC16Q9P2K2 825 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 TUBGCP4Q9UGJ1 667 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 TNFSF13BQ9Y275 285 aa10.9□□□□□ -0.66
CPSF1P1-201ENST00000397477 A8MUI8 341 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 APOL1O14791 398 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 ASAP2O43150 1006 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 TROVE2P10155 538 aaKnown RBP eCLIP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CYP2B6P20813 491 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 GEMIN4P57678 1058 aaKnown RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 AP1B1Q10567 949 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 NAA25Q14CX7 972 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC1A5Q15758 541 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 MROH9Q5TGP6 573 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 ANKRD20A3Q5VUR7 823 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CLEC4CQ8WTT0 213 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CKAP2Q8WWK9 683 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCT6BQ92526 530 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CPA4Q9UI42 421 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 PIGRP01833 764 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 VDRP11473 427 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 RNASELQ05823 741 aaKnown RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 DCAF6Q58WW2 860 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 TRIM68Q6AZZ1 485 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 PMF1Q6P1K2 205 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 TCP10LQ8TDR4 215 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 DNAJB3Q8WWF6 145 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CPT1BQ92523 772 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 EIF2AQ9BY44 585 aaKnown RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 PDZD7Q9H5P4 517 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 WDR35Q9P2L0 1181 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZC3H7BQ9UGR2 993 aaKnown RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 BARX2Q9UMQ3 279 aaPredicted RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 PPP2R3BQ9Y5P8 575 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CHUKO15111 745 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 TMEM63AO94886 807 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 KLRC2P26717 231 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC8A3P57103 927 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 BEX3Q00994 111 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCDC142Q17RM4 750 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 KBTBD12Q3ZCT8 623 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 SPDYCQ5MJ68 293 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 RHBDF2Q6PJF5 856 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 TTC16Q8NEE8 873 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 DPEP3Q9H4B8 488 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 NXF3Q9H4D5 531 aaKnown RBP10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 RSAD1Q9HA92 442 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 LRRC4Q9HBW1 653 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 QSER1Q2KHR3 1735 aa10.89□□□□□ -0.67
CPSF1P1-201ENST00000397477 C2orf71A6NGG8 1288 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 COPEO14579 308 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CXCL11O14625 94 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 NEBLO76041 1014 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 PYGBP11216 843 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CPA2P48052 419 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 WDR4P57081 412 aaKnown RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 DPYSL3Q14195 570 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CES3Q6UWW8 571 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 PLPPR4Q7Z2D5 763 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CNPY4Q8N129 248 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 FBXO41Q8TF61 875 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CNPY3Q9BT09 278 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 GCOM2Q9BZD3 368 aaPredicted RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 FZD8Q9H461 694 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 SLC17A7Q9P2U7 560 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 TRIM49D1C9J1S8 452 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 MAGEB2O15479 319 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 GAS2O43903 313 aaKnown RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 B4GALT4O60513 344 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CBX6O95503 412 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 C22orf31O95567 290 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 TRUB2O95900 331 aaKnown RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 ZNF200P98182 395 aaPredicted RBP10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CCDC6Q16204 474 aa10.88□□□□□ -0.67
CPSF1P1-201ENST00000397477 CA9Q16790 459 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms