RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CFAP221Q4G0U5 840 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 SLC8B1Q6J4K2 584 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 SIX6OS1Q8N1H7 587 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 EMC1Q8N766 993 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 GPR152Q8TDT2 470 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 ZBP1Q9H171 429 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 CRISPLD1Q9H336 500 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 CSNK1G1Q9HCP0 422 aa22.3■■□□□ 1.16
CPNE1-204ENST00000397443 PACSIN2Q9UNF0 486 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-204ENST00000397443 TCRBV5S1A1TA0A578 114 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 CAPN15O75808 1086 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 VNN2O95498 520 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 ACADSBP45954 432 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 SNX16P57768 344 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 MGAT5BQ3V5L5 792 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 CPNE8Q86YQ8 564 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 JOSD2Q8TAC2 188 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 FEZF2Q8TBJ5 459 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 MCRS1Q96EZ8 462 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 ENTPD7Q9NQZ7 604 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 WDR35Q9P2L0 1181 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 PCDHGC5Q9Y5F6 944 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-204ENST00000397443 HHLA1C9JL84 531 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 KIF2AO00139 706 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-204ENST00000397443 NCK2O43639 380 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 RFC1P35251 1148 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-204ENST00000397443 ERVFC1P60507 584 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 OLFML1Q6UWY5 402 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 POF1BQ8WVV4 589 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 FUBP3Q96I24 572 aaKnown RBP eCLIP22.29■■□□□ 1.16
CPNE1-204ENST00000397443 TCF25Q9BQ70 676 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 OXCT2Q9BYC2 517 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-204ENST00000397443 RWDD3Q9Y3V2 267 aa22.29■■□□□ 1.16
CPNE1-204ENST00000397443 CXCL14O95715 111 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 DNAJB1P25685 340 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 DAB2IPQ5VWQ8 1189 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 PLPP4Q5VZY2 271 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 LRRC57Q8N9N7 239 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 SCAMP5Q8TAC9 235 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 KCTD13Q8WZ19 329 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 PBX4Q9BYU1 374 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 ULBP1Q9BZM6 244 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 PCDHA11Q9Y5I1 949 aa22.28■■□□□ 1.16
CPNE1-204ENST00000397443 MYO1FO00160 1098 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 MTA2O94776 668 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 USP17L7P0C7H9 530 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 CTSAP10619 480 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 SLC6A3Q01959 620 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 CTAGE9A4FU28 777 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 SIGLEC16A6NMB1 481 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 TEX28O15482 410 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 ATP1A1P05023 1023 aaKnown RBP22.27■■□□□ 1.16
CPNE1-204ENST00000397443 RPL34P49207 117 aaKnown RBP22.27■■□□□ 1.16
CPNE1-204ENST00000397443 TCEAL1Q15170 157 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 PPP1R15BQ5SWA1 713 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 KIF18AQ8NI77 898 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 SPPL3Q8TCT6 385 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 SPPL2BQ8TCT7 592 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 MICAL1Q8TDZ2 1067 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 FAM149B1Q96BN6 582 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 TGS1Q96RS0 853 aaKnown RBP22.27■■□□□ 1.16
CPNE1-204ENST00000397443 PSMB7Q99436 277 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 NAPGQ99747 312 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-204ENST00000397443 PLVAPQ9BX97 442 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 NKX2-4Q9H2Z4 354 aa22.27■■□□□ 1.16
CPNE1-204ENST00000397443 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-204ENST00000397443 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-204ENST00000397443 TMEM191CA6NGB0 347 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 SPATA31D3P0C874 917 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 SLC5A3P53794 718 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 HADHBP55084 474 aaKnown RBP22.26■■□□□ 1.15
CPNE1-204ENST00000397443 OGDHQ02218 1023 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 TAP1Q03518 808 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 VSTM1Q6UX27 236 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 SPATA31D4Q6ZUB0 917 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 PEX26Q7Z412 305 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 CYLDQ9NQC7 956 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 USTQ9Y2C2 406 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 ALG6Q9Y672 507 aa22.26■■□□□ 1.15
CPNE1-204ENST00000397443 GRM6O15303 877 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 CNPP09543 421 aaKnown RBP22.25■■□□□ 1.15
CPNE1-204ENST00000397443 GSCP56915 257 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-204ENST00000397443 C11orf84Q9BUA3 381 aaPredicted RBP22.25■■□□□ 1.15
CPNE1-204ENST00000397443 ABCB6Q9NP58 842 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 STK39Q9UEW8 545 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 HIDE1A8MVS5 230 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 TRIM66O15016 1216 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 LILRB3O75022 631 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 SEC24AO95486 1093 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 COMTP21964 271 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 FLT3P36888 993 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 MRPS5P82675 430 aaKnown RBP22.25■■□□□ 1.15
CPNE1-204ENST00000397443 SMARCB1Q12824 385 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 RAB41Q5JT25 222 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 SYCE1Q8N0S2 351 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 ZNF461Q8TAF7 563 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 GIPC2Q8TF65 315 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 CYP4F11Q9HBI6 524 aa22.25■■□□□ 1.15
CPNE1-204ENST00000397443 TLR9Q9NR96 1032 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms