RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 ACSS3Q9H6R3 686 aa25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 PPARGC1AQ9UBK2 798 aaKnown RBP25.04■■□□□ 1.6
CSNK1E-203ENST00000396832 hCG_1818297A0A087WSY0 165 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 BUD23O43709 281 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 ETV4P43268 484 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 SCNN1BP51168 640 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 BPIFB4P59827 614 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 KLHL38Q2WGJ6 581 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 ACAD11Q709F0 780 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 SPATA24Q86W54 205 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 NME8Q8N427 588 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 MTBPQ96DY7 904 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 TARS2Q9BW92 718 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 IP6K2Q9UHH9 426 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 SNRPFP62306 86 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 OASLQ15646 514 aaKnown RBP25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 ZNF677Q86XU0 584 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 RCOR2Q8IZ40 523 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 LRRN4Q8WUT4 740 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 CTDP1Q9Y5B0 961 aaPredicted RBP25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 PCDHA10Q9Y5I2 948 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 CNTNAP1P78357 1384 aa25.03■■□□□ 1.6
CSNK1E-203ENST00000396832 GRIA2P42262 883 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 JAK3P52333 1124 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 INHBCP55103 352 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 PRKCEQ02156 737 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.02■■□□□ 1.62e-7■■□□□ 13.4
CSNK1E-203ENST00000396832 DNAAF2Q9NVR5 837 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 PCSK1NQ9UHG2 260 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 DRG1Q9Y295 367 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 RIPK3Q9Y572 518 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 EXTL3O43909 919 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 TMEM63AO94886 807 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 EDN1P05305 212 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 HIRAP54198 1017 aaPredicted RBP25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 MAP3K10Q02779 954 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 HNRNPDQ14103 355 aaKnown RBP25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 TFDP3Q5H9I0 405 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 PALM2Q8IXS6 379 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 OR6Y1Q8NGX8 325 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 CPT1BQ92523 772 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 SERAC1Q96JX3 654 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 PXMP2Q9NR77 195 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 NFASCO94856 1347 aa25.02■■□□□ 1.6
CSNK1E-203ENST00000396832 SPECC1L-ADORA2AF8WAN1 911 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 FAM155BO75949 473 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 VAV1P15498 845 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 NLGN1Q8N2Q7 840 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 EMC1Q8N766 993 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 GPAMQ9HCL2 828 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 ANKEF1Q9NU02 776 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 STRIP2Q9ULQ0 834 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 POLIQ9UNA4 740 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 CCDC195A0A1B0GUA6 201 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 TMEM191CA6NGB0 347 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 CST8O60676 142 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 CST3P01034 146 aaPredicted RBP25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 WEE2P0C1S8 567 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 TMEM191BP0C7N4 346 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 MED21Q13503 144 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 HSF5Q4G112 596 aaPredicted RBP25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 TMCO4Q5TGY1 634 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 PDSS2Q86YH6 399 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 FAM151AQ8WW52 585 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 MECRQ9BV79 373 aa25.01■■□□□ 1.59
CSNK1E-203ENST00000396832 AVILO75366 819 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 USP46P62068 366 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 KRT76Q01546 638 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 BAATQ14032 418 aaPredicted RBP25■■□□□ 1.59
CSNK1E-203ENST00000396832 ZBTB33Q86T24 672 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 SATL1Q86VE3 508 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 PHF13Q86YI8 300 aaPredicted RBP25■■□□□ 1.59
CSNK1E-203ENST00000396832 IGDCC3Q8IVU1 814 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 FAM71DQ8N9W8 422 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 NMD3Q96D46 503 aaKnown RBP25■■□□□ 1.59
CSNK1E-203ENST00000396832 MSTO1Q9BUK6 570 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 FBXO40Q9UH90 709 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 TAGLN3Q9UI15 199 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 RPS6KL1Q9Y6S9 549 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 DCAF8L1A6NGE4 600 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 TTLL13PA6NNM8 815 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 MAP3K6O95382 1288 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 CDKN2BP42772 138 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 MAP7Q14244 749 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 TAF5Q15542 800 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 MCF2L2Q86YR7 1114 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 SAMD3Q8N6K7 520 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 PCDH9Q9HC56 1237 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 KCNK4Q9NYG8 393 aa25■■□□□ 1.59
CSNK1E-203ENST00000396832 MARCOQ9UEW3 520 aaPredicted RBP25■■□□□ 1.59
CSNK1E-203ENST00000396832 KITP10721 976 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 MMP8P22894 467 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 TNFSF9P41273 254 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 SH3BGRP55822 239 aaPredicted RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 NCOA4Q13772 614 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 DNAL1Q4LDG9 190 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 GPAT2Q6NUI2 795 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 DPY19L2Q6NUT2 758 aa24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 PRPF39Q86UA1 669 aaKnown RBP24.99■■□□□ 1.59
CSNK1E-203ENST00000396832 UNC45BQ8IWX7 931 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms