RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ERVK-7P63135 1459 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 SLCO1B7G3V0H7 640 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 H7C1W4 665 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ECE2O60344 883 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TSNQ15631 228 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 NOA1Q8NC60 698 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 RPS6KL1Q9Y6S9 549 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PRRG1O14668 218 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 FAM58BPP0C7Q3 252 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 MRNIPQ6NTE8 343 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ZBTB49Q6ZSB9 765 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ENKURQ8TC29 256 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 STK39Q9UEW8 545 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 C1orf232A0A0U1RR37 186 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PEX1O43933 1283 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 POU1F1P28069 291 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ETFBP38117 255 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PLIN5Q00G26 463 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 NFYCQ13952 458 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TAB1Q15750 504 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 DGKKQ5KSL6 1271 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TYW3Q6IPR3 259 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TDRD5Q8NAT2 981 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TRAPPC9Q96Q05 1148 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ASB14A6NK59 587 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 KLK7P49862 253 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 RAD23AP54725 363 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 LRRC49Q8IUZ0 686 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PACSIN1Q9BY11 444 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 CYP19A1P11511 503 aaPredicted RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 SVOPQ8N4V2 548 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 CASKIN2Q8WXE0 1202 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 NRKQ7Z2Y5 1582 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TRIM43BA6NCK2 446 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 HOXD10P28358 340 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 PCSK1P29120 753 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 STIP1P31948 543 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 GPC1P35052 558 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 TMEM143Q96AN5 459 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 ZFYVE1Q9HBF4 777 aa14.45□□□□□ -0.1
COL4A3-202ENST00000396578 AAR2Q9Y312 384 aaKnown RBP14.45□□□□□ -0.1
COL4A3-202ENST00000396578 IGSF9BQ9UPX0 1349 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 H7C0S8 307 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 EXTL3O43909 919 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 TPP2P29144 1249 aaPredicted RBP14.44□□□□□ -0.1
COL4A3-202ENST00000396578 ATP6AP1LQ52LC2 224 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 OOSP2Q86WS3 158 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 EID3Q8N140 333 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 SRBD1Q8N5C6 995 aaKnown RBP14.44□□□□□ -0.1
COL4A3-202ENST00000396578 UXS1Q8NBZ7 420 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 BDH2Q9BUT1 245 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 KIFC1Q9BW19 673 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 CAPN10Q9HC96 672 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 ATP9AO75110 1047 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 RPS6KB2Q9UBS0 482 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF521Q96K83 1311 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 XKR3Q5GH77 459 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 ZNF618Q5T7W0 954 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 PLA2G4FQ68DD2 849 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 SLC44A2Q8IWA5 706 aaPredicted RBP14.44□□□□□ -0.1
COL4A3-202ENST00000396578 UBASH3BQ8TF42 649 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 SEPT1Q8WYJ6 367 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 TNFAIP8O95379 198 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 CYP4A22Q5TCH4 519 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 IL5RAQ01344 420 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 STX4Q12846 297 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 KCNT1Q5JUK3 1230 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 ANKS6Q68DC2 871 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 VN1R5Q7Z5H4 357 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 CCNJLQ8IV13 435 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 VPS33AQ96AX1 596 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 P4HA2O15460 535 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 GTF2H1P32780 548 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 R3HDM1Q15032 1099 aaKnown RBP14.44□□□□□ -0.1
COL4A3-202ENST00000396578 SPANXN2Q5MJ10 180 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 SEPT5Q99719 369 aaPredicted RBP14.44□□□□□ -0.1
COL4A3-202ENST00000396578 COPG2Q9UBF2 871 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 RAD54BQ9Y620 910 aa14.44□□□□□ -0.1
COL4A3-202ENST00000396578 CSNK2BP67870 215 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PDPK2PQ6A1A2 396 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 TRIM48Q8IWZ4 208 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 KATNAL1Q9BW62 490 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PALLDQ8WX93 1383 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MGAT4DA6NG13 374 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 SDR42E2A6NKP2 422 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 GSG1L2A8MUP6 293 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 VPS26AO75436 327 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ATP6V1G2O95670 118 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 ACAD10Q6JQN1 1059 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 PRMT9Q6P2P2 845 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 RAD9BQ6WBX8 426 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MTDHQ86UE4 582 aaKnown RBP14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FAM196BA6NMK8 535 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FAM20BO75063 409 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MFN2O95140 757 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 FASP25445 335 aa14.43□□□□□ -0.1
COL4A3-202ENST00000396578 MFSD4BQ5TF39 518 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms