RNA–Protein interactions for RNA: ENST00000394327.2

NUP58-204, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-204ENST00000394327 RAD9AQ99638 391 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 TMEM175Q9BSA9 504 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 TRIM5Q9C035 493 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 MMRN2Q9H8L6 949 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 GRPEL1Q9HAV7 217 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 RC3H2Q9HBD1 1191 aaKnown RBP6.72□□□□□ -1.33
NUP58-204ENST00000394327 IFNKQ9P0W0 207 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 GCNT4Q9P109 453 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 RWDD3Q9Y3V2 267 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 PTPRJQ12913 1337 aa6.72□□□□□ -1.33
NUP58-204ENST00000394327 A0A1W2PPC1 479 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 A0A1W2PQC6 194 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 ANO9A1A5B4 782 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 TMEM189-UBE2V1I3L0A0 370 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 ASS1P00966 412 aaKnown RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 HLA-DRAP01903 254 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 ITGB3P05106 788 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 KRT19P08727 400 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 P4HA1P13674 534 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 LAG3P18627 525 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 ALDH7A1P49419 539 aaKnown RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 NR1I3Q14994 352 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 SHHQ15465 462 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 NAB2Q15742 525 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 EXOC3L4Q17RC7 722 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 SGSM1Q2NKQ1 1148 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 SV2CQ496J9 727 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 EPC2Q52LR7 807 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 C9orf57Q5W0N0 161 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 LMBRD2Q68DH5 695 aaPredicted RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 ENOSF1Q7L5Y1 443 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 COLGALT2Q8IYK4 626 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 TDHQ8IZJ6 230 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 FIBCD1Q8N539 461 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 TAS1R2Q8TE23 839 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 ANP32BQ92688 251 aaKnown RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 C18orf25Q96B23 403 aaPredicted RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 MRFAP1L1Q96HT8 127 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 FAM46AQ96IP4 442 aaKnown RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 ERGIC2Q96RQ1 377 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 SPOCK3Q9BQ16 436 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 CORO1BQ9BR76 489 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 RSRP1Q9BUV0 290 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 COLEC11Q9BWP8 271 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 FAM124BQ9H5Z6 455 aaPredicted RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 TPSG1Q9NRR2 321 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 RAB20Q9NX57 234 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 MIOSQ9NXC5 875 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 STK39Q9UEW8 545 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 TUBGCP4Q9UGJ1 667 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 COL4A4P53420 1690 aaPredicted RBP6.71□□□□□ -1.34
NUP58-204ENST00000394327 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
NUP58-204ENST00000394327 CASTOR2A6NHX0 329 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 PODXLO00592 558 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 PIRO00625 290 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 TRAPPC3O43617 180 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 CLSTN1O94985 981 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 ALDH2P05091 517 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 TBXAS1P24557 533 aaPredicted RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 PPM1AP35813 382 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 GATA4P43694 442 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 TAF6P49848 677 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 GATMP50440 423 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 YWHAEP62258 255 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 RACK1P63244 317 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 TNNC1P63316 161 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 NOP14P78316 857 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 SOX4Q06945 474 aaPredicted RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 ELAVL2Q12926 359 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 SEPT6Q14141 434 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 UPP1Q16831 310 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 ZNF699Q32M78 642 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 PAN2Q504Q3 1202 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 ZNF667Q5HYK9 610 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 C9orf50Q5SZB4 431 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 SPOUT1Q5T280 376 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 TRIM65Q6PJ69 517 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 DCLRE1AQ6PJP8 1040 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 FMNL3Q8IVF7 1028 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 TTC39CQ8N584 583 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 SPATA18Q8TC71 538 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 JAKMIP2Q96AA8 810 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 HPDLQ96IR7 371 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 RHOVQ96L33 236 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 NAP1L5Q96NT1 182 aaPredicted RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 SAMD11Q96NU1 681 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 NT5C1BQ96P26 610 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 NUP58Q9BVL2 599 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 XPO4Q9C0E2 1151 aaKnown RBP6.7□□□□□ -1.34
NUP58-204ENST00000394327 DNAI2Q9GZS0 605 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 CXCL16Q9H2A7 254 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 NRDE2Q9H7Z3 1164 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 APEX2Q9UBZ4 518 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 SIX4Q9UIU6 781 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 FBXL5Q9UKA1 691 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 AGAP1Q9UPQ3 857 aa6.7□□□□□ -1.34
NUP58-204ENST00000394327 FAN1Q9Y2M0 1017 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms