RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 NOP14P78316 857 aaKnown RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 LSM11P83369 360 aaKnown RBP eCLIP6.24□□□□□ -1.414e-9■■■□□ 19.1
CASC3-202ENST00000394114 GALEQ14376 348 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 KIF22Q14807 665 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 CATSPER4Q7RTX7 472 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 TRAPPC11Q7Z392 1133 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 FAM71AQ8IYT1 594 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 VPS37AQ8NEZ2 397 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 SHC3Q92529 594 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 KCNN1Q92952 543 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 NOX5Q96PH1 765 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 PCDHB18PQ96TA0 734 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 APOL6Q9BWW8 343 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 IFT22Q9H7X7 185 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 RPF1Q9H9Y2 349 aaKnown RBP6.24□□□□□ -1.41
CASC3-202ENST00000394114 CDC23Q9UJX2 597 aa6.24□□□□□ -1.41
CASC3-202ENST00000394114 LACTBL1A8MY62 500 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 AGRPO00253 132 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 NEMP1O14524 444 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 DUSP11O75319 330 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 H2AFZP0C0S5 128 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CCDC172P0C7W6 258 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CYP11B1P15538 503 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CHRNB2P17787 502 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GPC1P35052 558 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 MTA1Q13330 715 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TRPC3Q13507 836 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TEX35Q5T0J7 233 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TMEM270Q6UE05 265 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 H2AFVQ71UI9 128 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 WDR49Q8IV35 697 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CBARPQ8N350 705 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 TRIM58Q8NG06 486 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ARHGEF26Q96DR7 871 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ERO1AQ96HE7 468 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 HHIPL1Q96JK4 782 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ALS2CR12Q96Q35 445 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SYT11Q9BT88 431 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 MENTQ9BUN1 341 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ADAMTS10Q9H324 1103 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SMARCAL1Q9NZC9 954 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SUCOQ9UBS9 1254 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 NXF1Q9UBU9 619 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 NOCTQ9UK39 431 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 HYOU1Q9Y4L1 999 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 A0A096LPE4 126 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 A0A1W2PPZ6 126 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 C17orf102A2RUQ5 167 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 NBNO60934 754 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 RNASEH2AO75792 299 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 WEE2P0C1S8 567 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 RARBP10826 455 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 PDE6CP51160 858 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GJA9P57773 515 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 AMPD2Q01433 879 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GCNT1Q02742 428 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CUL2Q13617 745 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GRM3Q14832 879 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 DUOXA2Q1HG44 320 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 C2CD6Q53TS8 623 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 PLA2G2CQ5R387 149 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 JADE1Q6IE81 842 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 PHLDB2Q86SQ0 1253 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SLC30A5Q8TAD4 765 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SELENOOQ9BVL4 669 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 EIF2AQ9BY44 585 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 NFKBIZQ9BYH8 718 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GCOM2Q9BZD3 368 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 IMPG2Q9BZV3 1241 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SLC13A1Q9BZW2 595 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 THAP2Q9H0W7 228 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CRTAC1Q9NQ79 661 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 XPNPEP3Q9NQH7 507 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 EHD2Q9NZN4 543 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 PCDHB4Q9Y5E5 795 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TNPO3Q9Y5L0 923 aaKnown RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 SAR1BQ9Y6B6 198 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SCN1AP35498 2009 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SCN10AQ9Y5Y9 1956 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 SMIM35A0A1B0GVV1 85 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 MBLAC1A4D2B0 266 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 K7ESF4 209 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 HAS3O00219 553 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GPR32O75388 356 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TADA3O75528 432 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 TNNC2P02585 160 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 FTLP02792 175 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 CLTAP09496 248 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 HOXA11P31270 313 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 RAP1GAPP47736 663 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 FMO1Q01740 532 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ZNF699Q32M78 642 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 GLRA4Q5JXX5 417 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 COL13A1Q5TAT6 717 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 MFSD4BQ5TF39 518 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ZNF410Q86VK4 478 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CAGE1Q8TC20 777 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 CTNNBL1Q8WYA6 563 aaPredicted RBP6.23□□□□□ -1.41
CASC3-202ENST00000394114 TTC17Q96AE7 1141 aa6.23□□□□□ -1.41
CASC3-202ENST00000394114 ADPGKQ9BRR6 497 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms