RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 UBE3CQ15386 1083 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TOR1AIP1Q5JTV8 583 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3GQ6DHY5 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3CQ6IPX1 549 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 PIWIL3Q7Z3Z3 882 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 KRT73Q86Y46 540 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TBC1D3Q8IZP1 549 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ZBTB44Q8NCP5 570 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SMARCC2Q8TAQ2 1214 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 WHAMMQ8TF30 809 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RNF141Q8WVD5 230 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.76□□□□□ -1.81
XRN1-202ENST00000392981 REXO5Q96IC2 774 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 MYO1AQ9UBC5 1043 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SYNJ1O43426 1573 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 BTBD18B2RXH4 712 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SIGLEC6O43699 453 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TSPAN3O60637 253 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 GPR32O75388 356 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SCGB2A1O75556 95 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 FLOT1O75955 427 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ADCY8P40145 1251 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 GSK3AP49840 483 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CTBP1Q13363 440 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ADRM1Q16186 407 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 DBN1Q16643 649 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 USP39Q53GS9 565 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 MRPL14Q6P1L8 145 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 UNC5BQ8IZJ1 945 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 POC5Q8NA72 575 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SPSB4Q96A44 273 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 MTMR12Q9C0I1 747 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 INTS2Q9H0H0 1204 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 CENPFP49454 3210 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SLC16A6O15403 523 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RAD17O75943 681 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 AKR7A3O95154 331 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 GLB1P16278 677 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CHRM3P20309 590 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PIK3CGP48736 1102 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PSMC6P62333 389 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TARBP2Q15633 366 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 CYB5RLQ6IPT4 315 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RPUSD3Q6P087 351 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 ARMC9Q7Z3E5 817 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 RTKN2Q8IZC4 609 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 LZTR1Q8N653 840 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SIMC1Q8NDZ2 872 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 FBXO30Q8TB52 745 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 FAM216AQ8WUB2 273 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 NSMCE1Q8WV22 266 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 C7orf43Q8WVR3 580 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 C1orf159Q96HA4 380 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CARD9Q9H257 536 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PABPC3Q9H361 631 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 SEMA6BQ9H3T3 888 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ERVK-5Q9HDB9 667 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 MYOTQ9UBF9 498 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PCDHB1Q9Y5F3 818 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 FLT1P17948 1338 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 MYPNQ86TC9 1320 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SIGLEC1Q9BZZ2 1709 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 H3BS24 57 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 MAN2B1O00754 1011 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CASQ2O14958 399 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 LSM1O15116 133 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 TMPRSS2O15393 492 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TYRP14679 529 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PDGFRAP16234 1089 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 IL1R2P27930 398 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 NUP62P37198 522 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 EPS15P42566 896 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ATP5OP48047 213 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 GLRBP48167 497 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 UCP3P55916 312 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 VAMP2P63027 116 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CARTPTQ16568 116 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CCDC57Q2TAC2 916 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SAMD5Q5TGI4 173 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 BICRALQ6AI39 1079 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SCARA3Q6AZY7 606 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 GHDCQ8N2G8 530 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CDYL2Q8N8U2 506 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TEKT4Q8WW24 435 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 CYFIP2Q96F07 1278 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 ZNF764Q96H86 408 aaPredicted RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 MOGAT1Q96PD6 335 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 A1CFQ9NQ94 594 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 PLSCR4Q9NRQ2 329 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 PCOLCE2Q9UKZ9 415 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 SMG5Q9UPR3 1016 aaKnown RBP3.76□□□□□ -1.81
XRN1-202ENST00000392981 JRKLQ9Y4A0 524 aa3.76□□□□□ -1.81
XRN1-202ENST00000392981 TOP2AP11388 1531 aaKnown RBP3.75□□□□□ -1.81
XRN1-202ENST00000392981 TMEM232C9JQI7 657 aa3.75□□□□□ -1.81
XRN1-202ENST00000392981 SH2B2O14492 632 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms