RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 MROH8Q9H579 483 aa11.34□□□□□ -0.59
BRF1-204ENST00000392557 SENP1Q9P0U3 644 aa11.34□□□□□ -0.59
BRF1-204ENST00000392557 MSCO60682 206 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 CCDC22O60826 627 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 MAP3K6O95382 1288 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 SKIV2L2P42285 1042 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 ABL2P42684 1182 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 BLMHQ13867 455 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 MXD4Q14582 209 aaPredicted RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 KHDC1Q4VXA5 237 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 TXNRD3NBQ6F5E7 133 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ATP11CQ8NB49 1132 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 TTC1Q99614 292 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ACO2Q99798 780 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 AVENQ9NQS1 362 aaPredicted RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 PPARGC1AQ9UBK2 798 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 LCTP09848 1927 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 A0A087WZ62 844 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 KRT36O76013 467 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 GM2AP17900 193 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ABCD1P33897 745 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 RAP1GAPP47736 663 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 NRLP54845 237 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 SATB1Q01826 763 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 C6orf163Q5TEZ5 329 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 SPOCD1Q6ZMY3 1216 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 FAM71DQ8N9W8 422 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ACTL9Q8TC94 416 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 FDXACB1Q9BRP7 624 aaPredicted RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 SCOCQ9UIL1 159 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ACTL7BQ9Y614 415 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 PTPRFP10586 1907 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 EME2A4GXA9 379 aaPredicted RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 OGTO15294 1046 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ENO1P06733 434 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 SKIP12755 728 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 BGNP21810 368 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 CCNA1P78396 465 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ZNF699Q32M78 642 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 SNX30Q5VWJ9 437 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 DSTYKQ6XUX3 929 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 KATNAL2Q8IYT4 538 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 CCDC33Q8N5R6 958 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 PPM1NQ8N819 430 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 KCTD6Q8NC69 237 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 FAM49AQ9H0Q0 323 aaPredicted RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 DCLRE1BQ9H816 532 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 ERAP1Q9NZ08 941 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 CPSF2Q9P2I0 782 aaKnown RBP11.33□□□□□ -0.6
BRF1-204ENST00000392557 SBF1O95248 1867 aa11.33□□□□□ -0.6
BRF1-204ENST00000392557 I3L4J1 428 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 PMM2O15305 246 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 OTUD4Q01804 1114 aaKnown RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 MOGSQ13724 837 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 THOC5Q13769 683 aaKnown RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 DUOXA2Q1HG44 320 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 C15orf39Q6ZRI6 1047 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 CLNKQ7Z7G1 428 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 BRSK2Q8IWQ3 736 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 TMEM174Q8WUU8 243 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TEKT4Q8WW24 435 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 SLITRK1Q96PX8 696 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TMEM134Q9H6X4 195 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 XPO7Q9UIA9 1087 aaKnown RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 CORO1CQ9ULV4 474 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 CNTNAP2Q9UHC6 1331 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 ARHGAP42A6NI28 874 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ASB14A6NK59 587 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ZBTB42B2RXF5 422 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 BTBD19C9JJ37 291 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 F5H423 210 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 H3BRJ5 948 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 UBTFL6P0CB48 400 aaPredicted RBP11.32□□□□□ -0.6
BRF1-204ENST00000392557 GNAT1P11488 350 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 PGM1P36871 562 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 NOMO3P69849 1222 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TMPRSS15P98073 1019 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 MORF4L2Q15014 288 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 LRRC36Q1X8D7 754 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 PARP6Q2NL67 630 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 HIPK4Q8NE63 616 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ZNF606Q8WXB4 792 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ARL8BQ9NVJ2 186 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 POLIQ9UNA4 740 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 WDR90Q96KV7 1748 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 H7C0C1 242 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 HBP1O60381 514 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ZC3H11AO75152 810 aaKnown RBP eCLIP11.32□□□□□ -0.6
BRF1-204ENST00000392557 ZWINTO95229 277 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 TNNC2P02585 160 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 LGALS2P05162 132 aa11.32□□□□□ -0.6
BRF1-204ENST00000392557 ATP5OP48047 213 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms