RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 SORCS3Q9UPU3 1222 aa20.4■□□□□ 0.86
SHANK1-203ENST00000391813 KCNK10P57789 538 aa20.4■□□□□ 0.86
SHANK1-203ENST00000391813 TRIM69Q86WT6 500 aa20.4■□□□□ 0.86
SHANK1-203ENST00000391813 CALML6Q8TD86 181 aa20.4■□□□□ 0.86
SHANK1-203ENST00000391813 CHORDC1Q9UHD1 332 aaPredicted RBP20.4■□□□□ 0.86
SHANK1-203ENST00000391813 ZC3H11AO75152 810 aaKnown RBP eCLIP20.39■□□□□ 0.86
SHANK1-203ENST00000391813 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.86
SHANK1-203ENST00000391813 BCL10O95999 233 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 ALADP13716 330 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 VCAM1P19320 739 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 HADHAP40939 763 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 KCNA1Q09470 495 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 PTK2BQ14289 1009 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 PDK1Q15118 436 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 WDR72Q3MJ13 1102 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 EPAS1Q99814 870 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 MAP3K20Q9NYL2 800 aaKnown RBP20.39■□□□□ 0.86
SHANK1-203ENST00000391813 ADGRB2O60241 1585 aa20.39■□□□□ 0.86
SHANK1-203ENST00000391813 OPLAHO14841 1288 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MAGEB2O15479 319 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 HLA-DPA1P20036 260 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 CYP2B6P20813 491 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 CASP7P55210 303 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MOXD1Q6UVY6 613 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 TUBGCP3Q96CW5 907 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 RIT2Q99578 217 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 GORASP1Q9BQQ3 440 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 NINJ2Q9NZG7 142 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MTSS1O43312 755 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 SFSWAPQ12872 951 aaKnown RBP20.39■□□□□ 0.85
SHANK1-203ENST00000391813 SEL1L3Q68CR1 1132 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MAGED4Q96JG8 741 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 RTFDC1Q9BY42 306 aaPredicted RBP20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MYRFQ9Y2G1 1151 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 RASSF9O75901 435 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 SSTR3P32745 418 aaPredicted RBP20.39■□□□□ 0.85
SHANK1-203ENST00000391813 BACE1P56817 501 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 MTM1Q13496 603 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 GCNAQ96QF7 691 aa20.39■□□□□ 0.85
SHANK1-203ENST00000391813 CXCL11O14625 94 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 RALBP11234 206 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 CYP11B1P15538 503 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 FDFT1P37268 417 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 HSD17B4P51659 736 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 TCP10LQ8TDR4 215 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 ASAP3Q8TDY4 903 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 TMEM79Q9BSE2 394 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 TRIM62Q9BVG3 475 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 MROH8Q9H579 483 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 LRRC4BQ9NT99 713 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 ARHGEF38Q9NXL2 777 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 APPL1Q9UKG1 709 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 E5RI56 91 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 OCM2P0CE71 109 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 OCMP0CE72 109 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 CDC25CP30307 473 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 C21orf59P57076 290 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 KIAA0895Q8NCT3 520 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 SEC23AQ15436 765 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 INAQ16352 499 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 THEM5Q8N1Q8 247 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 ATG4CQ96DT6 458 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 WNK4Q96J92 1243 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 LRMDAQ9H2I8 198 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 ZMYND8Q9ULU4 1186 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 TPST1O60507 370 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 SGPL1O95470 568 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 MUTP22033 750 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 EIF2B2P49770 351 aaKnown RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 AUHQ13825 339 aaKnown RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 PDPK2PQ6A1A2 396 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 C15orf52Q6ZUT6 534 aaKnown RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 CCDC60Q8IWA6 550 aaPredicted RBP20.38■□□□□ 0.85
SHANK1-203ENST00000391813 RBBP8Q99708 897 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 CNPY3Q9BT09 278 aa20.38■□□□□ 0.85
SHANK1-203ENST00000391813 A0A087WXM4 84 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 DNALI1O14645 258 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 SERPINB5P36952 375 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 RPL5P46777 297 aaKnown RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 LAYNQ6UX15 382 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 CCDC126Q96EE4 140 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 AGAP3Q96P47 875 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 THAP1Q9NVV9 213 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 DYNC1LI2O43237 492 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 RARBP10826 455 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 ZNF669Q96BR6 464 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 FAM163AQ96GL9 167 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 APOPT1Q96IL0 206 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 PPP1R16BQ96T49 567 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 DCLK3Q9C098 648 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 KCNK4Q9NYG8 393 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 TIMM44O43615 452 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 C6orf222P0C671 652 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 TXNRD3Q86VQ6 643 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 RIC8BQ9NVN3 520 aa20.37■□□□□ 0.85
SHANK1-203ENST00000391813 MANSC4A6NHS7 340 aaPredicted RBP20.37■□□□□ 0.85
SHANK1-203ENST00000391813 AKAP3O75969 853 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms