RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 TMEM169Q96HH4 297 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 EPN3Q9H201 632 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 NT5C1B-RDH14C9J2C7 533 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 ZNF263O14978 683 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
PSME4-201ENST00000389993 ENO3P13929 434 aaPredicted RBP15.14■□□□□ 0.01
PSME4-201ENST00000389993 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 MMGT1Q8N4V1 131 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 NT5MQ9NPB1 228 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 JCHAINP01591 159 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 MARCKSL1P49006 195 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 CRADDP78560 199 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 PDK1Q15118 436 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 STILQ15468 1287 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 SLC39A12Q504Y0 691 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 VSIG10LQ86VR7 867 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 ABRAQ8N0Z2 381 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 SHCBP1Q8NEM2 672 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 ETNPPLQ8TBG4 499 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 SEMA4DQ92854 862 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 PAK5Q9P286 719 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 ADCY3O60266 1144 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 CYP2F1P24903 491 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 MORF4L2Q15014 288 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 EFTUD2Q15029 972 aaKnown RBP eCLIP15.14■□□□□ 0.019e-8■■■□□ 19.2
PSME4-201ENST00000389993 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 TADA2BQ86TJ2 420 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 DPF3Q92784 378 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 ADAM2Q99965 735 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 CD274Q9NZQ7 290 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 LSM7Q9UK45 103 aaKnown RBP15.14■□□□□ 0.01
PSME4-201ENST00000389993 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 RPS6KL1Q9Y6S9 549 aa15.14■□□□□ 0.01
PSME4-201ENST00000389993 SEC24DO94855 1032 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 MYL4P12829 197 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 TBX2Q13207 712 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 ANO5Q75V66 913 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 NDRG1Q92597 394 aaKnown RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 AIM2O14862 343 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 SEC16BQ96JE7 1060 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CALR3Q96L12 384 aaKnown RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 SEMA4AQ9H3S1 761 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.13■□□□□ 0.011e-12■■□□□ 13.8
PSME4-201ENST00000389993 AURKCQ9UQB9 309 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 CKMP06732 381 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 TGM2P21980 687 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 HSDL1Q3SXM5 330 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CATSPERBQ9H7T0 1116 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CTNNAL1Q9UBT7 734 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CBX4O00257 560 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CXCL11O14625 94 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 SNRPFP62306 86 aaKnown RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 MMRN1Q13201 1228 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 PDCD2Q16342 344 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 CDC42EP4Q9H3Q1 356 aaKnown RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 PPP2R3BQ9Y5P8 575 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 KCNK1O00180 336 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 PPP3CCP48454 512 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 CAPSQ13938 189 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 STKLD1Q8NE28 680 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 N4BP2L2Q92802 583 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 DCUN1D1Q96GG9 259 aa15.13■□□□□ 0.01
PSME4-201ENST00000389993 XPO6Q96QU8 1125 aaKnown RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 CINPQ9BW66 212 aaPredicted RBP15.13■□□□□ 0.01
PSME4-201ENST00000389993 SKAP2O75563 359 aaPredicted RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 ALDH1A1P00352 501 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 STX3Q13277 289 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 PALB2Q86YC2 1186 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 ERP27Q96DN0 273 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 IGFLR1Q9H665 355 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 CHST12Q9NRB3 414 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 SIK3Q9Y2K2 1263 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 SMIM10L2AP0DMW4 78 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 SMIM10L2BP0DMW5 78 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 POU6F1Q14863 301 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 LONP2Q86WA8 852 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 POLBP06746 335 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 MFSD7Q6UXD7 560 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 FICDQ9BVA6 458 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 DONSONQ9NYP3 566 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 E2F6O75461 281 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 AGTP01019 485 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 WSCD1Q658N2 575 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 SYT15Q9BQS2 421 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 MTG1Q9BT17 334 aaPredicted RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 ACTR5Q9H9F9 607 aaPredicted RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 LCMT1Q9UIC8 334 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 DNPEPQ9ULA0 475 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 EIF3HO15372 352 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■■□□ 15.4
PSME4-201ENST00000389993 TARSP26639 723 aaKnown RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 BCAT1P54687 386 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 SYTL3Q4VX76 610 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 PTAR1Q7Z6K3 402 aaPredicted RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 LRRC34Q8IZ02 419 aa15.12■□□□□ 0.01
PSME4-201ENST00000389993 LNX1Q8TBB1 728 aaPredicted RBP15.12■□□□□ 0.01
PSME4-201ENST00000389993 ACTL9Q8TC94 416 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms