RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
SNRPB-201ENST00000381342 TSPAN16Q9UKR8 245 aa17.11■□□□□ 0.33
SNRPB-201ENST00000381342 HELZP42694 1942 aaKnown RBP17.1■□□□□ 0.33
SNRPB-201ENST00000381342 SRFP11831 508 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 NPR3P17342 541 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 SLC5A3P53794 718 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 POLR2FP61218 127 aaKnown RBP17.1■□□□□ 0.33
SNRPB-201ENST00000381342 CYP4F8P98187 520 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 DRAP1Q14919 205 aaPredicted RBP17.1■□□□□ 0.33
SNRPB-201ENST00000381342 DENND5BQ6ZUT9 1274 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 GAREM2Q75VX8 874 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 GPRIN1Q7Z2K8 1008 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 TTC30AQ86WT1 665 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 NPAS3Q8IXF0 933 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 FLCNQ8NFG4 579 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 NEK11Q8NG66 645 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
SNRPB-201ENST00000381342 IRF2BPLQ9H1B7 796 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 SMOC2Q9H3U7 446 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 NLRC4Q9NPP4 1024 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 GDE1Q9NZC3 331 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 WNT16Q9UBV4 365 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 NUMBLQ9Y6R0 609 aa17.1■□□□□ 0.33
SNRPB-201ENST00000381342 HHLA1C9JL84 531 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 ANHXE9PGG2 379 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 F8VZ95 297 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 FOXN3O00409 490 aaPredicted RBP17.09■□□□□ 0.33
SNRPB-201ENST00000381342 TADA3O75528 432 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 CFHP08603 1231 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 GNA15P30679 374 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 NUBP1P53384 320 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 BCAT1P54687 386 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 HTR4Q13639 388 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 TEAD2Q15562 447 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 STXBP5Q5T5C0 1151 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 POTEHQ6S545 545 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 GPIHBP1Q8IV16 184 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 MCRS1Q96EZ8 462 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 GCNAQ96QF7 691 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 DUSP16Q9BY84 665 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 IFNKQ9P0W0 207 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 HESX1Q9UBX0 185 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 KIAA1257Q9ULG3 409 aa17.09■□□□□ 0.33
SNRPB-201ENST00000381342 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNRPB-201ENST00000381342 M0QYV0 167 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 TULP2O00295 520 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 TNFRSF10BO14763 440 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 CYP26A1O43174 497 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 THAP12O43422 761 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 MICAL2O94851 1124 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 FGF19O95750 216 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 CDC25CP30307 473 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 PTPN5P54829 565 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 UBASH3AP57075 661 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-201ENST00000381342 LCLAT1Q6UWP7 414 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 FAM71AQ8IYT1 594 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 NUP93Q8N1F7 819 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 ANKRD52Q8NB46 1076 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 ST13P5Q8NFI4 369 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-201ENST00000381342 SCAMP5Q8TAC9 235 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 UBA3Q8TBC4 463 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 MYRFLQ96LU7 910 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 TTLL2Q9BWV7 592 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 ATXN3LQ9H3M9 355 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 SLITRK6Q9H5Y7 841 aa17.08■□□□□ 0.32
SNRPB-201ENST00000381342 UXTQ9UBK9 157 aaPredicted RBP17.08■□□□□ 0.32
SNRPB-201ENST00000381342 NARSO43776 548 aaKnown RBP17.07■□□□□ 0.32
SNRPB-201ENST00000381342 PDGFBP01127 241 aaPredicted RBP17.07■□□□□ 0.32
SNRPB-201ENST00000381342 F11P03951 625 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 CLCN1P35523 988 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 CLCN5P51795 746 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 JAM2P57087 298 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 PDE4CQ08493 712 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 BST2Q10589 180 aaKnown RBP17.07■□□□□ 0.32
SNRPB-201ENST00000381342 NR1I3Q14994 352 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 PARM1Q6UWI2 310 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 SLC47A2Q86VL8 602 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 SIX5Q8N196 739 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 STK33Q9BYT3 514 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 PNPLA8Q9NP80 782 aa17.07■□□□□ 0.32
SNRPB-201ENST00000381342 A0A1W2PQC6 194 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 RTN3O95197 1032 aaPredicted RBP17.06■□□□□ 0.32
SNRPB-201ENST00000381342 YWHAQP27348 245 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
SNRPB-201ENST00000381342 PFKPQ01813 784 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 TAF10Q12962 218 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 STILQ15468 1287 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 CNGA2Q16280 664 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 PKDCCQ504Y2 493 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 ARHGAP15Q53QZ3 475 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 GPR158Q5T848 1215 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 DENND1BQ6P3S1 775 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 PIGZQ86VD9 579 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 GAS2L3Q86XJ1 694 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 FGF14Q92915 247 aa17.06■□□□□ 0.32
SNRPB-201ENST00000381342 SECISBP2LQ93073 1101 aaKnown RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms