RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 HLA-DQA2P01906 255 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 RRM2P31350 389 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 ATP12AP54707 1039 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CYP20A1Q6UW02 462 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 BNIPLQ7Z465 357 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 PTAR1Q7Z6K3 402 aaPredicted RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 PPP1R2P1Q96PQ5 205 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CCT7Q99832 543 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 IL1RAPL1Q9NZN1 696 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 LAMC1P11047 1609 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 IQSEC2Q5JU85 1478 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 EIF3DO15371 548 aaKnown RBP eCLIP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 SUPT7LO94864 414 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 EIF2S1P05198 315 aaKnown RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 UMPSP11172 480 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CLK1P49759 484 aaKnown RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CCNG1P51959 295 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 RUNX1T1Q06455 604 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CNDP1Q96KN2 507 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 FAM187AA6NFU0 413 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 LRRC14BA6NHZ5 514 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 SUPT20HL2P0C7V6 817 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 GPATCH2LQ9NWQ4 482 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 PHF2O75151 1096 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 ATP2C1P98194 919 aaPredicted RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 KCNT1Q5JUK3 1230 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 RNF44Q7L0R7 432 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 MB21D2Q8IYB1 491 aaPredicted RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 KRT35Q92764 455 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 TMEM8AQ9HCN3 771 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CDHR2Q9BYE9 1310 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 GRID2IPA4D2P6 1211 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 TBC1D3BA6NDS4 549 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 NBPF9Q3BBW0 867 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 CES5AQ6NT32 575 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 KLHL24Q6TFL4 600 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 GPRASP2Q96D09 838 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 POP1Q99575 1024 aaKnown RBP14.59□□□□□ -0.07
TRIM13-202ENST00000378182 TRIM8Q9BZR9 551 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 SCN3BQ9NY72 215 aa14.59□□□□□ -0.07
TRIM13-202ENST00000378182 NPC1L1Q9UHC9 1359 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 ZNF682O95780 498 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 KLRC1P26715 233 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 SKIV2L2P42285 1042 aaKnown RBP14.58□□□□□ -0.07
TRIM13-202ENST00000378182 TSC22D1Q15714 1073 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 FAM83EQ2M2I3 478 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 TRIM71Q2Q1W2 868 aaKnown RBP14.58□□□□□ -0.07
TRIM13-202ENST00000378182 MARK2Q7KZI7 788 aaKnown RBP14.58□□□□□ -0.07
TRIM13-202ENST00000378182 P3H2Q8IVL5 708 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 UBXN6Q9BZV1 441 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 EPN3Q9H201 632 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 CYP39A1Q9NYL5 469 aa14.58□□□□□ -0.07
TRIM13-202ENST00000378182 SLC2A3P11169 496 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 DHX34Q14147 1143 aaKnown RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 VPS72Q15906 364 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 NFIL3Q16649 462 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 C16orf86Q6ZW13 317 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 TBX20Q9UMR3 447 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 PDXKO00764 312 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 GALCP54803 685 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 UNC45BQ8IWX7 931 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 ZSCAN18Q8TBC5 510 aaPredicted RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 USP7Q93009 1102 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 TUBGCP3Q96CW5 907 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 XPO6Q96QU8 1125 aaKnown RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 FICDQ9BVA6 458 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 ADGRE3Q9BY15 652 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 SYBUQ9NX95 663 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 NSMCE4AQ9NXX6 385 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 SH3BP4Q9P0V3 963 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 PAK5Q9P286 719 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 GPSM3Q9Y4H4 160 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 XPO1O14980 1071 aaKnown RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 TEX28O15482 410 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 TPST1O60507 370 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 AMD1P17707 334 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 GRK4P32298 578 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 VSNL1P62760 191 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 BOP1Q14137 746 aaKnown RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 MYCBPQ99417 103 aaPredicted RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 PNMA6AP0CW24 399 aaPredicted RBP14.58□□□□□ -0.08
TRIM13-202ENST00000378182 NAPEPLDQ6IQ20 393 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 FEZF2Q8TBJ5 459 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 ACOX2Q99424 681 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 OSBPL3Q9H4L5 887 aa14.58□□□□□ -0.08
TRIM13-202ENST00000378182 TK2O00142 265 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CCNT2O60583 730 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ANXA9O76027 345 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ANXA11P50995 505 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 RPL10AP62906 217 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 GUCY1A3Q02108 690 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SRSF11Q05519 484 aaKnown RBP14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SLC15A2Q16348 729 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 LINC00523Q86TU6 105 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 TPD52L3Q96J77 140 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CAMKK2Q96RR4 588 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 CGRRF1Q99675 332 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 ADM5C9JUS6 153 aa14.57□□□□□ -0.08
TRIM13-202ENST00000378182 SLC16A3O15427 465 aaKnown RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms