RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 SLC12A8A0AV02 714 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 VWA5AO00534 786 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SLC9A3R1O14745 358 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 UBTFL6P0CB48 400 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 OAZ1P54368 228 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 MRPS15P82914 257 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PKN3Q6P5Z2 889 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SLC35G2Q8TBE7 412 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 C1QTNF7Q9BXJ2 289 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ABCG4Q9H172 646 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 OSGEPL1Q9H4B0 414 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 MRPL40Q9NQ50 206 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 AGPAT3Q9NRZ7 376 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 KBTBD4Q9NVX7 518 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SFMBT1Q9UHJ3 866 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CRLS1Q9UJA2 301 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SLC39A10Q9ULF5 831 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 NDUFB5O43674 189 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PTPRAP18433 802 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 EFTUD2Q15029 972 aaKnown RBP eCLIP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PTRHD1Q6GMV3 140 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ZNF438Q7Z4V0 828 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SUSD6Q92537 303 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PDGFDQ9GZP0 370 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 TLR8Q9NR97 1041 aaKnown RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CCDC22O60826 627 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 PPP3CCP48454 512 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 IRAK1P51617 712 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ALDH5A1P51649 535 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-205ENST00000377670 SEC24CP53992 1094 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 EFEMP1Q12805 493 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 CNGA3Q16281 694 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 ANKS6Q68DC2 871 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 GMCL1P1Q8NEA9 526 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 DNAJC9Q8WXX5 260 aa11.23□□□□□ -0.61
HIF3A-205ENST00000377670 A0A087WZ62 844 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 EXTL3O43909 919 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 TRPC1P48995 793 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 TUFMP49411 452 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 NUMBP49757 651 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 MED21Q13503 144 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 OVOS1Q6IE37 1185 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 AGR3Q8TD06 166 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 CCDC3Q9BQI4 270 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 FDXACB1Q9BRP7 624 aaPredicted RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 CERS4Q9HA82 394 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 NPHS2Q9NP85 383 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 EML1O00423 815 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 SLC18A3Q16572 532 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 CCNYL1Q8N7R7 359 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 MRPS17Q9Y2R5 130 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 ATP9BO43861 1147 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 AGTP01019 485 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 SERPINB4P48594 390 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 LONRF1Q17RB8 773 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 FKBP1CQ5VVH2 108 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 IZUMO3Q5VZ72 239 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 LRRC8EQ6NSJ5 796 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 LRIG3Q6UXM1 1119 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 TRPM8Q7Z2W7 1104 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 CACUL1Q86Y37 369 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 SPATA18Q8TC71 538 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 RWDD3Q9Y3V2 267 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 DAB1O75553 588 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 HLA-DRAP01903 254 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 FKBP1AP62942 108 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 KIAA0895Q8NCT3 520 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 GFM2Q969S9 779 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 PDCD2LQ9BRP1 358 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 TRIM51Q9BSJ1 452 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 TSC22D4Q9Y3Q8 395 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 MRC1P22897 1456 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 GOLGA8RI6L899 631 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 AP3B1O00203 1094 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 GNRH1P01148 92 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 SERPINB3P29508 390 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 DHX34Q14147 1143 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 PCSK7Q16549 785 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 ATAT1Q5SQI0 421 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 NOL9Q5SY16 702 aaKnown RBP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 AGGF1Q8N302 714 aaeCLIP11.22□□□□□ -0.61
HIF3A-205ENST00000377670 RHBDL2Q9NX52 303 aa11.22□□□□□ -0.61
HIF3A-205ENST00000377670 CAPZA2P47755 286 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 THOP1P52888 689 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 OXCT1P55809 520 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 TTI2Q6NXR4 508 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 MPZL3Q6UWV2 235 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 PPP1R2P1Q96PQ5 205 aa11.21□□□□□ -0.61
HIF3A-205ENST00000377670 OMDQ99983 421 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms