RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 WSCD1Q658N2 575 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 C11orf63Q6NUN7 778 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 LLGL2Q6P1M3 1020 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 EGFL8Q99944 293 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 RGPD5Q99666 1765 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 A0A1B0GUA9 196 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 PJA2O43164 708 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 PRKAR2AP13861 404 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 YWHAZP63104 245 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 ZBTB41Q5SVQ8 909 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM71AQ8IYT1 594 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 TSPYL2Q9H2G4 693 aaPredicted RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 PIH1D1Q9NWS0 290 aaKnown RBP18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 SH3BP1Q9Y3L3 701 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 TRPV2Q9Y5S1 764 aa18.68■□□□□ 0.58
PTPDC1-202ENST00000375360 CHEK2O96017 543 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 BDNFP23560 247 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 RFC1P35251 1148 aaPredicted RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 FOXD4Q12950 439 aaPredicted RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 DEFB106AQ8N104 65 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 RPS6KL1Q9Y6S9 549 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 SLC12A8A0AV02 714 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 GYG2O15488 501 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 DCTN3O75935 186 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 C15orf59Q2T9L4 293 aaPredicted RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 C12orf29Q8N999 325 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 PPHLN1Q8NEY8 458 aaKnown RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 SHISA4Q96DD7 197 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 ZFP69BQ9UJL9 534 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 FARP1Q9Y4F1 1045 aaPredicted RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 NFKBIAP25963 317 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 MIPP30301 263 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 SPDYE1Q8NFV5 336 aaPredicted RBP18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 SENP1Q9P0U3 644 aa18.67■□□□□ 0.58
PTPDC1-202ENST00000375360 MARCKSL1P49006 195 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 ZSWIM2Q8NEG5 633 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 PPFIA2O75334 1257 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 F9P00740 461 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 POLBP06746 335 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 SNX17Q15036 470 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 CCNG2Q16589 344 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 NFE2Q16621 373 aaPredicted RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 LRIG3Q6UXM1 1119 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 TMC7Q7Z402 723 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 DDX27Q96GQ7 796 aaKnown RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 LRGUKQ96M69 825 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 SENP6Q9GZR1 1112 aaPredicted RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 CDC42EP4Q9H3Q1 356 aaKnown RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 KCNK1O00180 336 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 RAG1P15918 1043 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 LSP1P33241 339 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 IRAK1P51617 712 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FMO1Q01740 532 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 ZNF268Q14587 947 aaPredicted RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM110CQ1W6H9 321 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 DDX23Q9BUQ8 820 aaKnown RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 ETNK1Q9HBU6 452 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 CHST7Q9NS84 486 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 WRAP73Q9P2S5 460 aaPredicted RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM47DPA6NHR8 397 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM153BP0C7A2 387 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 SETSIPP0DME0 302 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 AMPD1P23109 780 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 MCL1Q07820 350 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM153CQ494X1 144 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FBXO36Q8NEA4 188 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 STAMBPL1Q96FJ0 436 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 FAM153AQ9UHL3 310 aa18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 REXO2Q9Y3B8 237 aaKnown RBP18.66■□□□□ 0.58
PTPDC1-202ENST00000375360 SNED1Q8TER0 1413 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 MYH2Q9UKX2 1941 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 MYO1CO00159 1063 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 PBX1P40424 430 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 KRT33BQ14525 404 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 PDK2Q15119 407 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 NXF3Q9H4D5 531 aaKnown RBP18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 SMPD4Q9NXE4 827 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 PCDHGC5Q9Y5F6 944 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 PCDHA3Q9Y5H8 950 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 TRIM49D1C9J1S8 452 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 RPL7AP62424 266 aaKnown RBP18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 ZNF280DQ6N043 979 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 ULK4Q96C45 1275 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 DDX50Q9BQ39 737 aaKnown RBP18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 CYP4F11Q9HBI6 524 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 RBPJLQ9UBG7 517 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 BAG5Q9UL15 447 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 ATRNL1Q5VV63 1379 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 A0A0B4J269 797 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 NVLO15381 856 aaKnown RBP18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 TLR2O60603 784 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 HAUS5O94927 633 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 CD52P31358 61 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 CCL23P55773 120 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 TFAP2DQ7Z6R9 452 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 SPATA24Q86W54 205 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 LRRC6Q86X45 466 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 SGF29Q96ES7 293 aa18.65■□□□□ 0.58
PTPDC1-202ENST00000375360 VCPIP1Q96JH7 1222 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms