RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 GPS1Q13098 491 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 CCDC38Q502W7 563 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ERMARDQ5T6L9 678 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 PRPF38BQ5VTL8 546 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 C1orf53Q5VUE5 145 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 HIBCHQ6NVY1 386 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ANKRD33Q7Z3H0 272 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 APBB1IPQ7Z5R6 666 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 NT5DC4Q86YG4 428 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 TTC39CQ8N584 583 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ALLCQ8N6M5 410 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 KCTD6Q8NC69 237 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 UBA3Q8TBC4 463 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 BADQ92934 168 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 RBM15Q96T37 977 aaKnown RBP eCLIP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 FOXP3Q9BZS1 431 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 TMEM39AQ9NV64 488 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 NINJ2Q9NZG7 142 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 PCSK1NQ9UHG2 260 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 CD4P01730 458 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 CLTBP09497 229 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 ZSCAN5DPP0CG00 497 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 GPD2P43304 727 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 PSEN2P49810 448 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 SLC25A11Q02978 314 aaKnown RBP12.68□□□□□ -0.38
HMGCL-202ENST00000374487 TMEM62Q0P6H9 643 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 MFSD10Q14728 455 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 FAM102AQ5T9C2 384 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-202ENST00000374487 GDF6Q6KF10 455 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-202ENST00000374487 ZCCHC9Q8N567 271 aaKnown RBP12.68□□□□□ -0.38
HMGCL-202ENST00000374487 OTUD6BQ8N6M0 293 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 WNT8BQ93098 351 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 CHMP6Q96FZ7 201 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 TMEM121Q9BTD3 319 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 NT5C1AQ9BXI3 368 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 FAM49AQ9H0Q0 323 aaPredicted RBP12.68□□□□□ -0.38
HMGCL-202ENST00000374487 EFR3BQ9Y2G0 817 aa12.68□□□□□ -0.38
HMGCL-202ENST00000374487 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 DNALI1O14645 258 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 CST8O60676 142 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ITGAVP06756 1048 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 IL1R2P27930 398 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 CYP2C18P33260 490 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GRM5P41594 1212 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 MAGEA9P43362 315 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 DCAF4L1Q3SXM0 396 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ARFGAP1Q8N6T3 406 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GLIS1Q8NBF1 620 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 TTC13Q8NBP0 860 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ARHGEF2Q92974 986 aaKnown RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 NKD2Q969F2 451 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 C9orf72Q96LT7 481 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 MIS12Q9H081 205 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 KIAA1257Q9ULG3 409 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 TPX2Q9ULW0 747 aaKnown RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 C3orf70A6NLC5 250 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 HAS3O00219 553 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 NDC80O14777 642 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 CABYRO75952 493 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 NPTXRO95502 500 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 F2P00734 622 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ETS1P14921 441 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 KDELR1P24390 212 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 MAGEA4P43358 317 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GABRB2P47870 512 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 YARSP54577 528 aaKnown RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GSCP56915 257 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 INCA1Q0VD86 236 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ACAP1Q15027 740 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 TNFAIP8L3Q5GJ75 292 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 GKAP1Q5VSY0 366 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 CATSPER4Q7RTX7 472 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 EXOC3L1Q86VI1 746 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 RELL1Q8IUW5 271 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 HSPH1Q92598 858 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 MCRS1Q96EZ8 462 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ADAM7Q9H2U9 754 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 FAM124BQ9H5Z6 455 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 ASNSD1Q9NWL6 643 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 SAE1Q9UBE0 346 aaPredicted RBP12.67□□□□□ -0.38
HMGCL-202ENST00000374487 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
HMGCL-202ENST00000374487 A0A087WUV0 522 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 PIK3R2O00459 728 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 STAU1O95793 577 aaKnown RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 MIPP30301 263 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 RDXP35241 583 aaKnown RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CCL23P55773 120 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CDC42EP1Q00587 391 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 OTUD4Q01804 1114 aaKnown RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 IFT88Q13099 833 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 RNF187Q5TA31 235 aaPredicted RBP12.66□□□□□ -0.38
HMGCL-202ENST00000374487 OR6B2Q6IFH4 312 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 SLC27A1Q6PCB7 646 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 LCLAT1Q6UWP7 414 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 ACTL9Q8TC94 416 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 PPM1EQ8WY54 764 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CABS1Q96KC9 395 aa12.66□□□□□ -0.38
HMGCL-202ENST00000374487 CALN1Q9BXU9 219 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms