RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 TRAPPC3O43617 180 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 GAS2O43903 313 aaKnown RBP8.13□□□□□ -1.11
HERC4-202ENST00000373700 CFHP08603 1231 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 EIF4BP23588 611 aaKnown RBP8.13□□□□□ -1.11
HERC4-202ENST00000373700 RABGGTBP53611 331 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ALDH18A1P54886 795 aaKnown RBP8.13□□□□□ -1.11
HERC4-202ENST00000373700 POU5F1BQ06416 359 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 SREBF2Q12772 1141 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ASPHQ12797 758 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 CYB5D1Q6P9G0 228 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 NPNTQ6UXI9 565 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ZPBP2Q6X784 338 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 PPIL6Q8IXY8 311 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 NDUFAF2Q8N183 169 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ARMC2Q8NEN0 867 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 EDEM1Q92611 657 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ZNF560Q96MR9 790 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 KATNAL1Q9BW62 490 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 RSAD1Q9HA92 442 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 KIF9Q9HAQ2 790 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ZFATQ9P243 1243 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 ARHGAP28Q9P2N2 729 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 HAO1Q9UJM8 370 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 GON4LQ3T8J9 2241 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 PAPPAQ13219 1627 aa8.13□□□□□ -1.11
HERC4-202ENST00000373700 CYB561D2O14569 222 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 PPFIA2O75334 1257 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 LYPLA2O95372 231 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ENO1P06733 434 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 CREB1P16220 341 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 CHRNB2P17787 502 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MAP3K7CLP57077 242 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 SKOR1P84550 965 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 C1QBPQ07021 282 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 MMRN1Q13201 1228 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 AUHQ13825 339 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 NFIL3Q16649 462 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 C4orf50Q6ZRC1 276 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 SLC7A14Q8TBB6 771 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 GTF3C2Q8WUA4 911 aaPredicted RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 TMEM176AQ96HP8 235 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MAML3Q96JK9 1138 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NUDCD1Q96RS6 583 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 TSSK1BQ9BXA7 367 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.12□□□□□ -1.11
HERC4-202ENST00000373700 SSX2IPQ9Y2D8 614 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MYPNQ86TC9 1320 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 KAT6AQ92794 2004 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NAV1Q8NEY1 1877 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MYH15Q9Y2K3 1946 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MANSC4A6NHS7 340 aaPredicted RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 SCAMP3O14828 347 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 PQBP1O60828 265 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 TADA2AO75478 443 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 HSPA4LO95757 839 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 CYP1A2P05177 515 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ATP4AP20648 1035 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MIPP30301 263 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 GCKP35557 465 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MLH1P40692 756 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MAP2K5Q13163 448 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 EFHC2Q5JST6 749 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MTHFD1LQ6UB35 978 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 SGSM3Q96HU1 749 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 TNIP3Q96KP6 325 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 LPIN3Q9BQK8 851 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ABCF3Q9NUQ8 709 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ZNF112Q9UJU3 913 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 STAP1Q9ULZ2 295 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 PHTF1Q9UMS5 762 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 MAFBQ9Y5Q3 323 aaPredicted RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 NCANO14594 1321 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 LOC100653049A0A140TA62 436 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 E5RJQ4 531 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 DFFAO00273 331 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 GPC4O75487 556 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 KRT34O76011 436 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NCAM1P13591 858 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 TAF6P49848 677 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ATXN3P54252 364 aaPredicted RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 VCPP55072 806 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 NOMO3P69849 1222 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 PRPSAP1Q14558 356 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 RPS6KA2Q15349 733 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 LRRC36Q1X8D7 754 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ARL13BQ3SXY8 428 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 FBXO47Q5MNV8 452 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 SLC39A4Q6P5W5 647 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NRAPQ86VF7 1730 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 WDR75Q8IWA0 830 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 CCT6BQ92526 530 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 ZNF516Q92618 1163 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 PAFAH2Q99487 392 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 UBP1Q9NZI7 540 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NOP53Q9NZM5 478 aaKnown RBP8.12□□□□□ -1.11
HERC4-202ENST00000373700 ZMYM2Q9UBW7 1377 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 NHSQ6T4R5 1651 aa8.12□□□□□ -1.11
HERC4-202ENST00000373700 BTNL10A8MVZ5 291 aa8.11□□□□□ -1.11
HERC4-202ENST00000373700 AKR1A1P14550 325 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms