RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 DDX20Q9UHI6 824 aaKnown RBP14.71□□□□□ -0.05
LMX1B-202ENST00000373474 TMEM131LA2VDJ0 1609 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 DGKIO75912 1065 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 MCL1Q07820 350 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 CYP24A1Q07973 514 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 PTK6Q13882 451 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 SAMD3Q8N6K7 520 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 FBXO25Q8TCJ0 367 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 ZNF669Q96BR6 464 aaPredicted RBP14.71□□□□□ -0.05
LMX1B-202ENST00000373474 CNDP1Q96KN2 507 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 RBBP8Q99708 897 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 GPRC5CQ9NQ84 441 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 ERAP1Q9NZ08 941 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 SLC24A2Q9UI40 661 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 ADAM30Q9UKF2 790 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 RIPK2O43353 540 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 ASNA1O43681 348 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 NDUFS3O75489 264 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 MAPTP10636 758 aaKnown RBP14.71□□□□□ -0.05
LMX1B-202ENST00000373474 NPTX2P47972 431 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 KBTBD12Q3ZCT8 623 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 COBLL1Q53SF7 1204 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 RXFP1Q9HBX9 757 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 DPP3Q9NY33 737 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.71□□□□□ -0.05
LMX1B-202ENST00000373474 SELENONQ9NZV5 590 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 POLIQ9UNA4 740 aa14.71□□□□□ -0.05
LMX1B-202ENST00000373474 TM9SF1O15321 606 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 ARIH2O95376 493 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 ATP6V1G2O95670 118 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 TCN1P20061 433 aaPredicted RBP14.71□□□□□ -0.06
LMX1B-202ENST00000373474 TCF7P36402 384 aaPredicted RBP14.71□□□□□ -0.06
LMX1B-202ENST00000373474 ATXN3P54252 364 aaPredicted RBP14.71□□□□□ -0.06
LMX1B-202ENST00000373474 PCSK7Q16549 785 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 CCDC149Q6ZUS6 474 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 DENND5BQ6ZUT9 1274 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 CCNJLQ8IV13 435 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 CCDC60Q8IWA6 550 aaPredicted RBP14.71□□□□□ -0.06
LMX1B-202ENST00000373474 ZNF786Q8N393 782 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 SLC25A41Q8N5S1 370 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 IPMKQ8NFU5 416 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 CNPY3Q9BT09 278 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 SLC39A10Q9ULF5 831 aa14.71□□□□□ -0.06
LMX1B-202ENST00000373474 PURAQ00577 322 aaKnown RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 ARHGAP17Q68EM7 881 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 FAM210AQ96ND0 272 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PAFAH2Q99487 392 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 DUSP9Q99956 384 aaKnown RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 SASH3O75995 380 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 CALB2P22676 271 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 SERPINB8P50452 374 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 WASHC5Q12768 1159 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 MEA1Q16626 185 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 EFHBQ8N7U6 833 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 GANCQ8TET4 914 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PDZK1P1A8MUH7 402 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 TRAPPC3O43617 180 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 NPTXRO95502 500 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 LSM8O95777 96 aaKnown RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PNPLA4P41247 253 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 OTUD4Q01804 1114 aaKnown RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 ACCSLQ4AC99 568 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PPP4R4Q6NUP7 873 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 DCLRE1BQ9H816 532 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 RNF103O00237 685 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 RAD51Q06609 339 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 ANGPT1Q15389 498 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 MFN1Q8IWA4 741 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 ATG4CQ96DT6 458 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 CD274Q9NZQ7 290 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 ABT1Q9ULW3 272 aaKnown RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 SPATA31A5Q5VU36 1347 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 SPATA31A7Q8IWB4 1347 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PIK3CDO00329 1044 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 VDRP11473 427 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 PCNX4Q63HM2 1172 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 SYTL2Q9HCH5 934 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 MYOZ2Q9NPC6 264 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 USE1Q9NZ43 259 aa14.7□□□□□ -0.06
LMX1B-202ENST00000373474 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.7□□□□□ -0.06
LMX1B-202ENST00000373474 DNALI1O14645 258 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 OGTO15294 1046 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 GUCA1CO95843 209 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 CNTFP26441 200 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 NUDT2P50583 147 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 KCNK10P57789 538 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 KIZQ2M2Z5 673 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 TMC3Q7Z5M5 1100 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 LRRC6Q86X45 466 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 PNMA5Q96PV4 448 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 OSBPL10Q9BXB5 764 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 TMEM120AQ9BXJ8 343 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 ILKAPQ9H0C8 392 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 RNPEPQ9H4A4 650 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 FAM153AQ9UHL3 310 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 LOC100653049A0A140TA62 436 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 KRT34O76011 436 aa14.69□□□□□ -0.06
LMX1B-202ENST00000373474 PSMA4P25789 261 aaKnown RBP14.69□□□□□ -0.06
LMX1B-202ENST00000373474 SCUBE1Q8IWY4 988 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms