RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 PCDHB18PQ96TA0 734 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 NFKBIZQ9BYH8 718 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 DCLK3Q9C098 648 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 LNPEPQ9UIQ6 1025 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 KCNG1Q9UIX4 513 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 NAALADL1Q9UQQ1 740 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 NEU2Q9Y3R4 380 aa12.02□□□□□ -0.49
TSPAN1-201ENST00000372003 TCRBV7S2A1N4TA0A589 114 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ZBBXA8MT70 800 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 B4GALT5O43286 388 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 PEX11AO75192 247 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 LRRN2O75325 713 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 NPTXRO95502 500 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ASMTLO95671 621 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 PRKCBP05771 671 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 PFKMP08237 780 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 KCNJ1P48048 391 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 EFNA5P52803 228 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 NCKAP1LP55160 1127 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 SARNPP82979 210 aaKnown RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 CDR2Q01850 454 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 IKBKEQ14164 716 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 MPP2Q14168 576 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 CCNG2Q16589 344 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ZC3H12AQ5D1E8 599 aaKnown RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 TMEM240Q5SV17 173 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ACAD10Q6JQN1 1059 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 CNKSR3Q6P9H4 555 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 CDR2LQ86X02 465 aaPredicted RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 SYCP3Q8IZU3 236 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC17A8Q8NDX2 589 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 DENND1AQ8TEH3 1009 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 SHC3Q92529 594 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 MAML1Q92585 1016 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 APBB2Q92870 758 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 UTP4Q969X6 686 aaKnown RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ZNF653Q96CK0 615 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 GDF15Q99988 308 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 ARHGAP28Q9P2N2 729 aa12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
TSPAN1-201ENST00000372003 LRRD1A4D1F6 860 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TTLL13PA6NNM8 815 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 A8MUI8 341 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 MGEA5O60502 916 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TSPAN1O60635 241 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 EDN1P05305 212 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TPBGLP0DKB5 382 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 NEFHP12036 1026 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 CREB1P16220 341 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 CHKAP35790 457 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 FMO1Q01740 532 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ZRSR2Q15696 482 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 PDK4Q16654 411 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 KYNUQ16719 465 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC45A4Q5BKX6 768 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 C9orf50Q5SZB4 431 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 PSRC1Q6PGN9 363 aaPredicted RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TAS1R3Q7RTX0 852 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ANKS1BQ7Z6G8 1248 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 NOP9Q86U38 636 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 RTN4RL1Q86UN2 441 aaPredicted RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 ARHGEF19Q8IW93 802 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 GDAP1Q8TB36 358 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ACCSQ96QU6 501 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ADAM2Q99965 735 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 OSBPL1AQ9BXW6 950 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 MYLK2Q9H1R3 596 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 FZD8Q9H461 694 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 SLC24A3Q9HC58 644 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 PRMT7Q9NVM4 692 aaPredicted RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 FETUBQ9UGM5 382 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 GGT7Q9UJ14 662 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 COQ4Q9Y3A0 265 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 EVPLQ92817 2033 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ARID2Q68CP9 1835 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ANKRD33BA6NCL7 494 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 H0YCG3 227 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ACKR2O00590 384 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ENPP3O14638 875 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 EDF1O60869 148 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 LINGO3P0C6S8 592 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ARF4P18085 180 aaPredicted RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 FOXN2P32314 431 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ABL2P42684 1182 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 SHHQ15465 462 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 AMHR2Q16671 573 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TWF2Q6IBS0 349 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 PPP1R2P3Q6NXS1 205 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12□□□□□ -0.49
TSPAN1-201ENST00000372003 ENOSF1Q7L5Y1 443 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 TRABD2AQ86V40 505 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 KIRREL3Q8IZU9 778 aa12□□□□□ -0.49
TSPAN1-201ENST00000372003 ZCCHC9Q8N567 271 aaKnown RBP12□□□□□ -0.49
TSPAN1-201ENST00000372003 XXYLT1Q8NBI6 393 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms